CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PGUG_02831
(
Candida guilliermondii
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
PGUG_02831
T59966_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGUT_02831
S1
80
161
KPFKGEVVDAVVTTVNKMGFFADVGPLSVFVSTHLIPSDMKFNPSANPPAYVSPDENIEKGSRVRLKIVGTRMDVNEIYAIG
Links
Other
S1
family RBPs
Other
Candida guilliermondii
RBPs
15 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Cd36_01440
Candida dubliniensis
Cd36_01440
N
0.976
DEHA0G08195g
Debaryomyces hansenii
DEHA0G08195g
N
0.976
fgenesh1_pg.C_chr_1.1000254
Pichia stipitis
fgenesh1_pg.C_chr_1.1000254
N
0.976
RPB7
Candida albicans
orf19.3347
N
0.976
CLUG_03627
Candida lusitaniae
CLUG_03627
N
0.952
CPAG_00867
Candida parapsilosis
CPAG_00867
N
0.940
LELG_01428
Lodderomyces elongisporus
LELG_01428
N
0.940
CTRG_04454
Candida tropicalis
CTRG_04454
N
0.892
YALI0D11627g
Yarrowia lipolytica
YALI0D11627g
N
0.780
SJAG_01436
Schizosaccharomyces japonicus
SJAG_01436
N
0.744
PredSwiss_CON2711.1
Pneumocystis carinii
PredSwiss_CON2711.1
N
0.732
SPOG_03808
Schizosaccharomyces cryophilus
SPOG_03808
N
0.732
XP_002494355.1
Pichia pastoris
XP_002494355.1
N
0.723
SOCG_01722
Schizosaccharomyces octosporus
SOCG_01722
N
0.720
rpb7
Schizosaccharomyces pombe
SPACUNK4.06c
N
0.707