SOCG_01722 (Schizosaccharomyces octosporus)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 SOCG_01722 T60006_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SOCG_01722T0 S1 81 160

Links

Other S1 family RBPs
Other Schizosaccharomyces octosporus RBPs

17 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SPOG_03808 Schizosaccharomyces cryophilus SPOG_03808 N 0.988
SJAG_01436 Schizosaccharomyces japonicus SJAG_01436 N 0.963
rpb7 Schizosaccharomyces pombe SPACUNK4.06c N 0.925
YALI0D11627g Yarrowia lipolytica YALI0D11627g N 0.738
estExt_Genewise1Plus.C_31798 Mucor circinelloides estExt_Genewise1Plus.C_31798 N 0.725
CPAG_00867 Candida parapsilosis CPAG_00867 N 0.723
DEHA0G08195g Debaryomyces hansenii DEHA0G08195g N 0.723
fgenesh1_pg.C_chr_1.1000254 Pichia stipitis fgenesh1_pg.C_chr_1.1000254 N 0.723
LELG_01428 Lodderomyces elongisporus LELG_01428 N 0.723
Cd36_01440 Candida dubliniensis Cd36_01440 N 0.723
RPB7 Candida albicans orf19.3347 N 0.723
PredSwiss_CON2711.1 Pneumocystis carinii PredSwiss_CON2711.1 N 0.720
PGUG_02831 Candida guilliermondii PGUG_02831 N 0.720
CC1G_04529 Coprinopsis cinerea CC1G_04529 N 0.713
estExt_fgeneshPB_pg.C_480042 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_480042 N 0.713
CLUG_03627 Candida lusitaniae CLUG_03627 N 0.711
PredSwiss_ASS2010_1331.1 Pneumocystis carinii PredSwiss_ASS2010_1331.1 N 0.700