RBM5 (Ornithorhynchus anatinus)
RanBP ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00641 (zf-RanBP)
PF00076 (RRM_1) 		IPR001876
IPR000504 		ENSOANG00000006557 T25613_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM5
M145_0.6 		Homo sapiens SAAGGRG RNAcompete
Ray et al.(2013)
RNCMPT00154 		0.977
RBM5
M053_0.6 		Homo sapiens GARGGWR RNAcompete
Ray et al.(2013)
RNCMPT00055 		0.977
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOANP00000010466 RRM 40 111
ENSOANP00000010466 RanBP ZF 121 150
ENSOANP00000010466 RRM 173 242
ENSOANP00000010467 RRM 40 106
ENSOANP00000010467 RanBP ZF 122 151
ENSOANP00000010467 RRM 174 243

Links

Other RanBP ZF,RRM family RBPs
Other Ornithorhynchus anatinus RBPs

48 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R008692 Ailuropoda melanoleuca Ame_R008692 I 0.977
RBM5 Anolis carolinensis ENSACAG00000008580 I 0.892
RBM5_BOVIN Bos taurus ENSBTAG00000006330 I 0.977
A6MKZ6_CALJA Callithrix jacchus ENSCJAG00000004740 I 0.977
RBM5 Canis familiaris ENSCAFG00000010866 I 0.977
RBM5 Cavia porcellus ENSCPOG00000008151 I 0.977
RBM5 Choloepus hoffmanni ENSCHOG00000009429 I 0.907
Rbm5 Dipodomys ordii ENSDORG00000007692 I 0.977
RBM5 Echinops telfairi ENSETEG00000012773 I 0.936
LOC100052535 Equus caballus ENSECAG00000020447 I 0.977
RBM5 Erinaceus europaeus ENSEEUG00000005943 I 0.972
RBM5 Felis catus ENSFCAG00000014639 N 0.887
RBM5 Gallus gallus ENSGALG00000004626 I 0.931
RBM5 Gasterosteus aculeatus ENSGACG00000000858 I 0.715
RBM5 Gasterosteus aculeatus ENSGACG00000010469 I 0.703
RBM5 Gorilla gorilla ENSGGOG00000014490 I 0.878
RBM5 Homo sapiens ENSG00000003756 D 0.977
RBM5 Loxodonta africana ENSLAFG00000006733 I 0.977
RBM5 Macaca mulatta ENSMMUG00000004921 I 0.977
RBM5 Macropus eugenii ENSMEUG00000012994 N 0.949
RBM5 Meleagris gallopavo ENSMGAG00000003972 I 0.938
RBM5 Microcebus murinus ENSMICG00000016179 N 0.965
RBM5 Monodelphis domestica ENSMODG00000012301 I 0.988
Rbm5 Mus musculus ENSMUSG00000032580 I 0.977
RBM5 Myotis lucifugus ENSMLUG00000007875 I 0.971
RBM5 Ochotona princeps ENSOPRG00000015154 I 0.769
RBM5 Oryctolagus cuniculus ENSOCUG00000011652 I 0.960
RBM5 Oryzias latipes ENSORLG00000003369 I 0.739
RBM5 Pan troglodytes ENSPTRG00000014946 I 0.977
RBM5 Procavia capensis ENSPCAG00000005459 I 0.793
RBM5 Pteropus vampyrus ENSPVAG00000006812 I 0.971
Rbm5 Rattus norvegicus ENSRNOG00000018153 I 0.977
RBM5 Sorex araneus ENSSARG00000009724 I 0.796
RBM5 Spermophilus tridecemlineatus ENSSTOG00000013856 I 0.977
RBM5 Sus scrofa ENSSSCG00000011395 I 0.977
RBM5 Taeniopygia guttata ENSTGUG00000006417 I 0.938
RBM5 Takifugu rubripes ENSTRUG00000008292 I 0.739
RBM5 Tarsius syrichta ENSTSYG00000004158 I 0.760
RBM5 Tetraodon nigroviridis ENSTNIG00000014742 I 0.718
RBM5 Tupaia belangeri ENSTBEG00000005424 I 0.899
RBM5 Tursiops truncatus ENSTTRG00000007717 I 0.972
RBM5 Vicugna pacos ENSVPAG00000009388 I 0.942
AAH77408 Xenopus laevis AAH77408 I 0.838
AAI26020 Xenopus laevis AAI26020 I 0.838
Q6DDU9 Xenopus laevis Q6DDU9 I 0.838
A0JMV4 Xenopus laevis A0JMV4 I 0.838
rbm5 Xenopus tropicalis ENSXETG00000007303 I 0.817