CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PGUG_03493
(
Candida guilliermondii
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
PGUG_03493
T30099_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGUT_03493
RRM
96
166
IYVGRLPHGLYEKEMRQYFDQFGEISRLRISRNKKTGKSKHYGFIEFQDKEVAKIACEAMNNYLVFGHMLQ
Links
Other
RRM
family RBPs
Other
Candida guilliermondii
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CTRG_05067
Candida tropicalis
CTRG_05067
N
0.704
DEHA0A05764g
Debaryomyces hansenii
DEHA0A05764g
N
0.732
e_gw1.10.335.1
Mucor circinelloides
e_gw1.10.335.1
N
0.732
gw1.198.122.1
Physcomitrella patens
gw1.198.122.1
N
0.704
GSTUMT00006382001
Tuber melanosporum
GSTUMT00006382001
N
0.704