ACLA_023580 (Aspergillus clavatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CADACLAG00002187 T33362_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CADACLAP00002140 RRM 94 166
CADACLAP00002140 RRM 187 257
CADACLAP00002140 RRM 313 377

Links

Other RRM family RBPs
Other Aspergillus clavatus RBPs

44 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AB00309.1 Alternaria brassicicola AB00309.1 N 0.873
fgenesh1_pm.00083_#_553 Aspergillus carbonarius fgenesh1_pm.00083_#_553 N 0.952
AFLA_067600 Aspergillus flavus CADAFLAG00008184 N 0.962
AFUA_1G12000 Aspergillus fumigatus CADAFUAG00007354 N 0.780
ANIA_10164 Aspergillus nidulans CADANIAG00001543 N 0.928
An08g04280 Aspergillus niger CADANGAG00006749 N 0.952
AO090001000353 Aspergillus oryzae CADAORAG00000317 N 0.962
ATEG_00398 Aspergillus terreus CADATEAG00007828 N 0.952
CHGG_05573 Chaetomium globosum CHGG_05573 N 0.732
CIMG_09023 Coccidioides immitis CIMG_09023 N 0.919
CPSG_01385 Coccidioides posadasii CPSG_01385 N 0.914
estExt_Genewise1.C_11570 Cochliobolus heterostrophus C5 estExt_Genewise1.C_11570 N 0.873
GLRG_08449 Colletotrichum graminicola GLRG_08449 N 0.885
estExt_Genewise1Plus.C_11264 Cryphonectria parasitica estExt_Genewise1Plus.C_11264 N 0.885
FGSG_05417 Fusarium graminearum FGSG_05417 N 0.842
FOXG_09482 Fusarium oxysporum FOXG_09482 N 0.861
FVEG_07111 Fusarium verticillioides FVEG_07111 N 0.861
HCAG_09244 Histoplasma capsulatum HCAG_09244 N 0.789
MCYG_03737 Microsporum canis MCYG_03737 N 0.914
MGYG_03339 Microsporum gypseum MGYG_03339 N 0.896
estExt_fgenesh1_kg.C_40363 Myceliophthora thermophila estExt_fgenesh1_kg.C_40363 N 0.890
estExt_Genewise1.C_140496 Mycosphaerella fijiensis estExt_Genewise1.C_140496 N 0.886
e_gw1.2.1591.1 Mycosphaerella graminicola e_gw1.2.1591.1 N 0.886
estExt_Genewise1Plus.C_sca_10_chr8_2_00705 Nectria haematococca estExt_Genewise1Plus.C_sca_10_chr8_2_00705 N 0.880
NFIA_013530 Neosartorya fischeri CADNFIAG00000800 N 0.957
NCU07874 Neurospora crassa NCU07874 N 0.904
estExt_fgenesh3_kg.C_200038 Neurospora discreta estExt_fgenesh3_kg.C_200038 N 0.859
PABG_03400 Paracoccidioides brasiliensis PABG_03400 N 0.904
Pc12g15120 Penicillium chrysogenum Pc12g15120 N 0.933
PMAA_098010 Penicillium marneffei PMAA_098010 N 0.909
EAT81850.2 Phaeosphaeria nodorum EAT81850.2 N 0.864
Pa_7_10990 Podospora anserina Pa_7_10990 N 0.890
PTRG_10065 Pyrenophora tritici repentis PTRG_10065 N 0.864
SS1G_03339 Sclerotinia sclerotiorum SS1G_03339 N 0.871
SNOG_10456 Stagonospora nodorum SNOG_10456 N 0.864
estExt_Genewise1Plus.C_32201 Thielavia terrestris estExt_Genewise1Plus.C_32201 N 0.890
estExt_fgenesh1_pg.C_90049 Trichoderma atroviride estExt_fgenesh1_pg.C_90049 N 0.871
estExt_GeneWisePlus.C_11433 Trichoderma reesei estExt_GeneWisePlus.C_11433 N 0.885
e_gw1.32.97.1 Trichoderma virens e_gw1.32.97.1 N 0.885
TEQG_03955 Trichophyton equinum TEQG_03955 N 0.909
TERG_05178 Trichophyton rubrum TERG_05178 N 0.909
TESG_05056 Trichophyton tonsurans TESG_05056 N 0.752
GSTUMT00010135001 Tuber melanosporum GSTUMT00010135001 N 0.909
VDBG_07004 Verticillium albo atrum VDBG_07004 N 0.833