CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ATEG_08730
(
Aspergillus terreus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
CADATEAG00006712
T33763_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADATEAP00006712
RRM
113
186
LLISDLFWWTTDDDIRGWVRQADCEDELKDVTFSEHKVNGKSKGQVFVEFTSLQAATATKHKIESFNITGQTGR
Links
Other
RRM
family RBPs
Other
Aspergillus terreus
RBPs
16 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ACLA_034850
Aspergillus clavatus
CADACLAG00004062
N
0.784
AFLA_101100
Aspergillus flavus
CADAFLAG00011847
N
0.824
AFUA_3G06890
Aspergillus fumigatus
CADAFUAG00005682
N
0.770
ANIA_04799
Aspergillus nidulans
CADANIAG00005622
N
0.784
AO090020000304
Aspergillus oryzae
CADAORAG00006798
N
0.824
CIMG_00383
Coccidioides immitis
CIMG_00383
N
0.730
CPSG_05134
Coccidioides posadasii
CPSG_05134
N
0.743
HCAG_07243
Histoplasma capsulatum
HCAG_07243
N
0.784
MCYG_08048
Microsporum canis
MCYG_08048
N
0.743
MGYG_05499
Microsporum gypseum
MGYG_05499
N
0.711
NFIA_070360
Neosartorya fischeri
CADNFIAG00005684
N
0.770
NCU02152
Neurospora crassa
NCU02152
N
0.716
fgenesh3_pm.C_scaffold_2000208
Neurospora discreta
fgenesh3_pm.C_scaffold_2000208
N
0.716
estExt_fgenesh1_pg.C_70148
Neurospora tetrasperma
estExt_fgenesh1_pg.C_70148
N
0.716
PABG_00859
Paracoccidioides brasiliensis
PABG_00859
N
0.757
UREG_00439
Uncinocarpus reesii
UREG_00439
N
0.757