CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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HNRNPH3
(
Dasypus novemcinctus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSDNOG00000004881
T36296_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDNOP00000003774
RRM
18
87
VRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIE
ENSDNOP00000003774
RRM
227
264
XXXXXXXXGEADVEFVTHEDAVAAMSKDKNNMQHRYIE
Links
Other
RRM
family RBPs
Other
Dasypus novemcinctus
RBPs
32 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAEL002272
Aedes aegypti
AAEL002272
N
0.000
AGAP005940
Anopheles gambiae
AGAP005940
N
0.000
amel4_ncbi_hmm4222
Apis mellifera
amel4_ncbi_hmm4222
I
0.000
BGIBMGA011690
Bombyx mori
BGIBMGA011690
N
0.000
CpipJ_CPIJ007352
Culex pipiens
CpipJ_CPIJ007352
N
0.000
CPIJ007352
Culex quinquefasciatus
CPIJ007352
N
0.000
GF10271
Drosophila ananassae
FBgn0087312
N
0.000
GG14260
Drosophila erecta
FBgn0106521
N
0.000
GH24419
Drosophila grimshawi
FBgn0131875
N
0.000
GH15361
Drosophila grimshawi
FBgn0122833
N
0.000
YT521-B
Drosophila melanogaster
FBgn0027616
N
0.000
GI12962
Drosophila mojavensis
FBgn0135719
N
0.000
GA28277-RA
Drosophila pseudoobscura
FBgn0249640
N
0.000
GM14053
Drosophila sechellia
FBgn0168982
N
0.000
GD13329
Drosophila simulans
FBgn0185047
N
0.000
GJ13107
Drosophila virilis
FBgn0200334
N
0.000
GK20378
Drosophila willistoni
FBgn0222375
N
0.000
GE20687
Drosophila yakuba
FBgn0237992
N
0.000
nasonia_NCBI_hmm460384
Nasonia vitripennis
nasonia_NCBI_hmm460384
I
0.000
PHUM305930
Pediculus humanus
PHUM305930
I
0.000