CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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G3BP2
(
Dasypus novemcinctus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSDNOG00000012491
T36345_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
G3BP2
M021_0.6
Homo sapiens
AGGAUDR
RNAcompete
Ray et al.(2013)
RNCMPT00021
0.970
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDNOP00000009694
RRM
332
398
LFVGNLPHDINENELKEFFMSSGNVVELRINTKGVGGKLPNFGFVVFDDSEPVQRILIAKPIMFRGE
Links
Other
RRM
family RBPs
Other
Dasypus novemcinctus
RBPs
83 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R007258
Ailuropoda melanoleuca
Ame_R007258
I
0.970
Ame_R008928
Ailuropoda melanoleuca
Ame_R008928
I
0.716
G3BP2
Anolis carolinensis
ENSACAG00000008695
I
0.940
G3BP1
Anolis carolinensis
ENSACAG00000009792
I
0.701
Q2KJ17_BOVIN
Bos taurus
ENSBTAG00000014041
I
0.970
G3BP1_BOVIN
Bos taurus
ENSBTAG00000020309
I
0.701
e_gw.517.12.1
Branchiostoma floridae
e_gw.517.12.1
I
0.729
e_gw.9.159.1
Branchiostoma floridae
e_gw.9.159.1
I
0.729
G3BP1
Callithrix jacchus
ENSCJAG00000015407
I
0.701
LOC100413275
Callithrix jacchus
ENSCJAG00000019897
I
0.970
G3BP1
Canis familiaris
ENSCAFG00000017841
I
0.716
G3BP2
Canis familiaris
ENSCAFG00000008371
I
0.970
G3BP2
Cavia porcellus
ENSCPOG00000012052
I
0.970
ENSCPOG00000006626
Cavia porcellus
ENSCPOG00000006626
I
0.701
G3BP2
Choloepus hoffmanni
ENSCHOG00000005346
I
0.940
ENSCHOG00000010802
Choloepus hoffmanni
ENSCHOG00000010802
I
0.701
ENSDARG00000011704
Danio rerio
ENSDARG00000011704
I
0.881
g3bp2
Danio rerio
ENSDARG00000014790
I
0.851
G3BP2
Danio rerio
ENSDARG00000074572
I
0.881
G3BP1
Dasypus novemcinctus
ENSDNOG00000018758
I
0.701
G3bp2
Dipodomys ordii
ENSDORG00000004825
I
0.970
G3BP2
Echinops telfairi
ENSETEG00000016219
I
0.925
G3BP1
Echinops telfairi
ENSETEG00000017447
I
0.701
G3BP2
Equus caballus
ENSECAG00000007917
I
0.970
LOC100060090
Equus caballus
ENSECAG00000003368
I
0.701
G3BP2
Erinaceus europaeus
ENSEEUG00000013436
I
0.970
G3BP1
Erinaceus europaeus
ENSEEUG00000012278
I
0.701
G3BP2
Felis catus
ENSFCAG00000010124
I
0.970
G3BP2
Gallus gallus
ENSGALG00000010882
I
0.940
G3BP2
Gasterosteus aculeatus
ENSGACG00000017342
I
0.881
G3BP2
Gorilla gorilla
ENSGGOG00000014947
I
0.970
G3BP2
Homo sapiens
ENSG00000138757
D
0.970
G3BP1
Homo sapiens
ENSG00000145907
D
0.716
G3BP2
Loxodonta africana
ENSLAFG00000023321
I
0.970
G3BP1
Loxodonta africana
ENSLAFG00000009182
I
0.701
G3BP1
Macaca mulatta
ENSMMUG00000014701
I
0.701
G3BP2
Macaca mulatta
ENSMMUG00000002153
I
0.970
G3BP2
Macropus eugenii
ENSMEUG00000004126
I
0.955
G3BP1
Meleagris gallopavo
ENSMGAG00000005963
I
0.746
G3BP2
Meleagris gallopavo
ENSMGAG00000007221
I
0.940
G3BP2
Microcebus murinus
ENSMICG00000007795
I
0.970
G3BP1
Microcebus murinus
ENSMICG00000012235
I
0.716
G3BP2
Monodelphis domestica
ENSMODG00000019205
I
0.955
G3bp2
Mus musculus
ENSMUSG00000029405
I
0.970
G3BP2
Myotis lucifugus
ENSMLUG00000004753
I
0.970
G3BP1
Myotis lucifugus
ENSMLUG00000001581
I
0.701
G3BP2
Ochotona princeps
ENSOPRG00000006307
I
0.970
G3BP1
Ochotona princeps
ENSOPRG00000010562
I
0.701
G3BP1
Ornithorhynchus anatinus
ENSOANG00000005110
I
0.746
ENSOANG00000004714
Ornithorhynchus anatinus
ENSOANG00000004714
I
0.955
G3BP2
Oryctolagus cuniculus
ENSOCUG00000003262
I
0.970
ENSOCUG00000022069
Oryctolagus cuniculus
ENSOCUG00000022069
I
0.701
ENSOCUG00000022143
Oryctolagus cuniculus
ENSOCUG00000022143
I
0.701
G3BP2
Oryzias latipes
ENSORLG00000007012
I
0.910
G3BP1
Oryzias latipes
ENSORLG00000011422
I
0.716
G3BP2
Otolemur garnettii
ENSOGAG00000000157
I
0.970
G3BP2
Pan troglodytes
ENSPTRG00000016175
I
0.970
G3BP1
Pan troglodytes
ENSPTRG00000017438
I
0.716
ENSPPYG00000014846
Pongo pygmaeus
ENSPPYG00000014846
I
0.970
ENSPPYG00000015968
Pongo pygmaeus
ENSPPYG00000015968
I
0.716
G3BP2
Procavia capensis
ENSPCAG00000015109
I
0.970
G3BP2
Pteropus vampyrus
ENSPVAG00000010166
I
0.970
G3BP1
Pteropus vampyrus
ENSPVAG00000017250
I
0.701
G3bp1
Rattus norvegicus
ENSRNOG00000013186
I
0.701
G3bp2
Rattus norvegicus
ENSRNOG00000002433
I
0.970
ENSRNOG00000001595
Rattus norvegicus
ENSRNOG00000001595
I
0.806
G3BP2
Sorex araneus
ENSSARG00000009503
I
0.970
ENSSSCG00000017080
Sus scrofa
ENSSSCG00000017080
I
0.701
ENSSSCG00000017079
Sus scrofa
ENSSSCG00000017079
I
0.701
G3BP1
Taeniopygia guttata
ENSTGUG00000000753
I
0.746
G3BP2
Taeniopygia guttata
ENSTGUG00000001561
I
0.940
G3BP2
Takifugu rubripes
ENSTRUG00000011405
I
0.896
G3BP1
Tarsius syrichta
ENSTSYG00000004570
I
0.701
G3BP2
Tetraodon nigroviridis
ENSTNIG00000011044
I
0.881
G3BP1
Tupaia belangeri
ENSTBEG00000004386
I
0.701
ENSTBEG00000012323
Tupaia belangeri
ENSTBEG00000012323
I
0.970
ENSTBEG00000008258
Tupaia belangeri
ENSTBEG00000008258
I
0.955
G3BP2
Tursiops truncatus
ENSTTRG00000013795
I
0.955
G3BP2
Vicugna pacos
ENSVPAG00000010710
I
0.970
G3BP1
Vicugna pacos
ENSVPAG00000004461
I
0.701
AAH76729
Xenopus laevis
AAH76729
I
0.836
g3bp1
Xenopus tropicalis
ENSXETG00000010712
I
0.716
g3bp2
Xenopus tropicalis
ENSXETG00000000334
I
0.881