ENSSSCG00000017079 (Sus scrofa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSSSCG00000017079 T41539_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
G3BP1
M302_0.6 		Homo sapiens Sequence logo not available ACCCMYMSGCMS SELEX
Cook et al.(2011)
432_11604510 		0.969
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000018094 RRM 349 412

Links

Other RRM family RBPs
Other Sus scrofa RBPs

86 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSSSCG00000017080 Sus scrofa ENSSSCG00000017080 I 1.000
LOC100060090 Equus caballus ENSECAG00000003368 I 0.984
ENSOCUG00000022069 Oryctolagus cuniculus ENSOCUG00000022069 I 0.984
ENSOCUG00000022143 Oryctolagus cuniculus ENSOCUG00000022143 I 0.984
G3BP1 Erinaceus europaeus ENSEEUG00000012278 I 0.984
G3BP1 Dasypus novemcinctus ENSDNOG00000018758 I 0.984
ENSCHOG00000010802 Choloepus hoffmanni ENSCHOG00000010802 I 0.984
G3BP1_BOVIN Bos taurus ENSBTAG00000020309 I 0.984
G3BP1 Callithrix jacchus ENSCJAG00000015407 I 0.984
G3BP1 Vicugna pacos ENSVPAG00000004461 I 0.984
G3BP1 Echinops telfairi ENSETEG00000017447 I 0.984
G3BP1 Macaca mulatta ENSMMUG00000014701 I 0.984
G3BP1 Loxodonta africana ENSLAFG00000009182 I 0.984
G3BP1 Tupaia belangeri ENSTBEG00000004386 I 0.984
G3BP1 Tarsius syrichta ENSTSYG00000004570 I 0.984
G3BP1 Myotis lucifugus ENSMLUG00000001581 I 0.984
ENSPPYG00000015968 Pongo pygmaeus ENSPPYG00000015968 I 0.969
G3BP1 Microcebus murinus ENSMICG00000012235 I 0.969
Ame_R008928 Ailuropoda melanoleuca Ame_R008928 I 0.969
G3BP1 Pan troglodytes ENSPTRG00000017438 I 0.969
G3BP1 Pteropus vampyrus ENSPVAG00000017250 I 0.969
G3BP1 Homo sapiens ENSG00000145907 D 0.969
G3BP1 Canis familiaris ENSCAFG00000017841 I 0.969
G3bp1 Mus musculus ENSMUSG00000018583 I 0.953
ENSCPOG00000006626 Cavia porcellus ENSCPOG00000006626 I 0.953
G3bp1 Rattus norvegicus ENSRNOG00000013186 I 0.938
G3BP1 Ochotona princeps ENSOPRG00000010562 I 0.938
G3BP1 Meleagris gallopavo ENSMGAG00000005963 I 0.906
G3BP1 Ornithorhynchus anatinus ENSOANG00000005110 I 0.906
G3BP1 Taeniopygia guttata ENSTGUG00000000753 I 0.906
G3BP1 Spermophilus tridecemlineatus ENSSTOG00000015928 I 0.875
g3bp1 Xenopus tropicalis ENSXETG00000010712 I 0.844
G3BP1 Gasterosteus aculeatus ENSGACG00000016848 I 0.812
XM_001369493.1 Monodelphis domestica ENSMODG00000008993 I 0.812
G3BP1 Anolis carolinensis ENSACAG00000009792 I 0.812
Q5ZMN1_CHICK Gallus gallus ENSGALG00000004160 N 0.803
AAH45051 Xenopus laevis AAH45051 I 0.781
g3bp1 Danio rerio ENSDARG00000017741 I 0.781
G3BP1 Oryzias latipes ENSORLG00000011422 I 0.781
G3BP1 Tetraodon nigroviridis ENSTNIG00000012954 I 0.781
AAH72830 Xenopus laevis AAH72830 I 0.766
G3BP2 Oryzias latipes ENSORLG00000007012 I 0.746
XM_001367627.1 Monodelphis domestica ENSMODG00000013903 N 0.732
G3BP2 Anolis carolinensis ENSACAG00000008695 I 0.731
G3BP2 Tetraodon nigroviridis ENSTNIG00000011044 I 0.731
G3BP2 Sorex araneus ENSSARG00000009503 I 0.716
G3bp2 Rattus norvegicus ENSRNOG00000002433 I 0.716
G3BP2 Monodelphis domestica ENSMODG00000019205 I 0.716
G3BP2 Pteropus vampyrus ENSPVAG00000010166 I 0.716
G3BP2 Ochotona princeps ENSOPRG00000006307 I 0.716
G3BP2 Macaca mulatta ENSMMUG00000002153 I 0.716
G3BP2 Procavia capensis ENSPCAG00000015109 I 0.716
G3BP2 Otolemur garnettii ENSOGAG00000000157 I 0.716
G3BP2 Pan troglodytes ENSPTRG00000016175 I 0.716
ENSOANG00000004714 Ornithorhynchus anatinus ENSOANG00000004714 I 0.716
ENSPPYG00000014846 Pongo pygmaeus ENSPPYG00000014846 I 0.716
G3BP2 Oryctolagus cuniculus ENSOCUG00000003262 I 0.716
G3bp2 Mus musculus ENSMUSG00000029405 I 0.716
G3BP2 Felis catus ENSFCAG00000010124 I 0.716
G3BP2 Cavia porcellus ENSCPOG00000012052 I 0.716
ENSTBEG00000012323 Tupaia belangeri ENSTBEG00000012323 I 0.716
g3bp2 Danio rerio ENSDARG00000014790 I 0.716
G3BP2 Myotis lucifugus ENSMLUG00000004753 I 0.716
LOC100413275 Callithrix jacchus ENSCJAG00000019897 I 0.716
G3BP2 Canis familiaris ENSCAFG00000008371 I 0.716
G3BP2 Taeniopygia guttata ENSTGUG00000001561 I 0.716
G3BP2 Vicugna pacos ENSVPAG00000010710 I 0.716
Ame_R007258 Ailuropoda melanoleuca Ame_R007258 I 0.716
Q2KJ17_BOVIN Bos taurus ENSBTAG00000014041 I 0.716
G3BP2 Takifugu rubripes ENSTRUG00000011405 I 0.716
G3bp2 Dipodomys ordii ENSDORG00000004825 I 0.716
G3BP2 Loxodonta africana ENSLAFG00000023321 I 0.716
G3BP2 Macropus eugenii ENSMEUG00000004126 I 0.716
G3BP2 Meleagris gallopavo ENSMGAG00000007221 I 0.716
G3BP2 Microcebus murinus ENSMICG00000007795 I 0.716
G3BP2 Gorilla gorilla ENSGGOG00000014947 I 0.716
G3BP2 Gallus gallus ENSGALG00000010882 I 0.716
G3BP2 Equus caballus ENSECAG00000007917 I 0.716
G3BP2 Erinaceus europaeus ENSEEUG00000013436 I 0.716
G3BP2 Homo sapiens ENSG00000138757 D 0.716
G3BP2 Gasterosteus aculeatus ENSGACG00000017342 I 0.716
ENSTBEG00000008258 Tupaia belangeri ENSTBEG00000008258 I 0.701
G3BP2 Danio rerio ENSDARG00000074572 I 0.701
G3BP2 Dasypus novemcinctus ENSDNOG00000012491 I 0.701
ENSDARG00000011704 Danio rerio ENSDARG00000011704 I 0.701
G3BP2 Tursiops truncatus ENSTTRG00000013795 I 0.701