Q5ZKQ9_CHICK (Gallus gallus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSGALG00000006457 T37655_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBMX
M344_0.6 		Homo sapiens CCM SELEX
Cook et al.(2011)
922_19282290 		1.000
RBMY1A1
M247_0.6 		Homo sapiens CWCAA SELEX
Cook et al.(2011)
1053_17318228 		0.803
RBMY1A1
M246_0.6 		Homo sapiens CWCAA SELEX
Cook et al.(2011)
1052_17318228 		0.803
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000010414 RRM 10 80

Links

Other RRM family RBPs
Other Gallus gallus RBPs

83 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002869589.1 Arabidopsis lyrata fgenesh2_kg.7__1649__AT4G26000.1 N 0.000
PEP Arabidopsis thaliana AT4G26000-TAIR-G N 0.000
Cucsa.089000 Cucumis sativus Cucsa.089000 N 0.000
Glyma13g00510.1 Glycine max Glyma13g00510.1 N 0.000
Glyma09g06750.1 Glycine max Glyma09g06750.1 N 0.000
chr4.CM0244.150.nd Lotus japonicus chr4.CM0244.150.nd N 0.000
MDP0000135143 Malus x domestica MDP0000135143 N 0.000
cassava18339.valid.m1 Manihot esculenta cassava18339.valid.m1 N 0.000
Medtr8g129730 Medicago truncatula Medtr8g129730 N 0.000
Medtr2g042750 Medicago truncatula Medtr2g042750 N 0.000
mgf013216m Mimulus guttatus mgf013216m N 0.000
B9N6B7_POPTR Populus trichocarpa POPTR_0006s29200 N 0.000
ppa004405m Prunus persica ppa004405m N 0.000
28226.m000850 Ricinus communis 28226.m000850 N 0.000
30198.m000862 Ricinus communis 30198.m000862 N 0.000
GSVIVG00029319001 Vitis vinifera GSVIVG00029319001 N 0.000