TARDBP (Macropus eugenii)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMEUG00000006548 T38207_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
TARDBP
M074_0.6 		Homo sapiens GAAUGD RNAcompete
Ray et al.(2013)
RNCMPT00076 		0.942
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMEUP00000005974 RRM 106 174
ENSMEUP00000005974 RRM 193 244

Links

Other RRM family RBPs
Other Macropus eugenii RBPs

59 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SCL28 Arabidopsis thaliana AT5G18810-TAIR-G N 0.000
PK03835.1 Cannabis sativa PK03835.1 N 0.000
Cucsa.253680 Cucumis sativus Cucsa.253680 N 0.000
Glyma07g38270.1 Glycine max Glyma07g38270.1 N 0.000
Glyma17g02470.1 Glycine max Glyma17g02470.1 N 0.000
chr4.LjT32J05.120.nc Lotus japonicus chr4.LjT32J05.120.nc N 0.000
cassava19116.valid.m1 Manihot esculenta cassava19116.valid.m1 N 0.000
cassava19117.valid.m1 Manihot esculenta cassava19117.valid.m1 N 0.000
Medtr8g139830 Medicago truncatula Medtr8g139830 N 0.000
mgf013231m Mimulus guttatus mgf013231m N 0.000
B9HM84_POPTR Populus trichocarpa POPTR_0008s20120 N 0.000
ppa010343m Prunus persica ppa010343m N 0.000
ppa010360m Prunus persica ppa010360m N 0.000
29726.m003960 Ricinus communis 29726.m003960 N 0.000
SB01G034590 Sorghum bicolor Sb01g034590 N 0.000
GSVIVG00022010001 Vitis vinifera GSVIVG00022010001 N 0.000