SCL28 (Arabidopsis thaliana)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 AT5G18810-TAIR-G T32819_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AT5G18810.1-P RRM 49 119

Links

Other RRM family RBPs
Other Arabidopsis thaliana RBPs

14 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
A9PDA2_POPTR Populus trichocarpa POPTR_0010s02700 N 0.845
B9HM84_POPTR Populus trichocarpa POPTR_0008s20120 N 0.845
cassava19117.valid.m1 Manihot esculenta cassava19117.valid.m1 N 0.817
cassava19116.valid.m1 Manihot esculenta cassava19116.valid.m1 N 0.817
29726.m003960 Ricinus communis 29726.m003960 N 0.817
ppa010360m Prunus persica ppa010360m N 0.803
ppa010343m Prunus persica ppa010343m N 0.803
Cucsa.253680 Cucumis sativus Cucsa.253680 N 0.789
GSVIVG00022010001 Vitis vinifera GSVIVG00022010001 N 0.775
Glyma07g38270.1 Glycine max Glyma07g38270.1 N 0.775
Glyma17g02470.1 Glycine max Glyma17g02470.1 N 0.775
Medtr8g139830 Medicago truncatula Medtr8g139830 N 0.775
PK03835.1 Cannabis sativa PK03835.1 N 0.775
chr4.LjT32J05.120.nc Lotus japonicus chr4.LjT32J05.120.nc N 0.761