CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ESRP2
(
Monodelphis domestica
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMODG00000005183
T39081_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
ESRP2
M141_0.6
Homo sapiens
UGGGRAD
RNAcompete
Ray et al.(2013)
RNCMPT00150
0.772
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMODP00000006381
RRM
25
93
VRARGLPWQSSDQDIARFFKGLNIAKGGRGPCANAQGRRTGEALVRFVDSEQRDLSLERHKHHMGARYI
ENSMODP00000006381
RRM
126
198
IRMRGLPFTATPGDVLAFLGPECPVTGGPEGLLFVHYPDGRPTGDAFALFACEELAQGALRKHKGILGKRYIE
ENSMODP00000006381
RRM
246
318
VRLRGLPYTASIDDILGFLGEAAGDIRPHGVHMVLNQQGRPSGDAFIQMKSADRALVAAQRCHKKMMKERYVE
Links
Other
RRM
family RBPs
Other
Monodelphis domestica
RBPs
69 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R011562
Ailuropoda melanoleuca
Ame_R011562
I
0.763
Ame_R015210
Ailuropoda melanoleuca
Ame_R015210
I
0.796
ESRP1
Anolis carolinensis
ENSACAG00000003748
I
0.769
ESRP2
Anolis carolinensis
ENSACAG00000009900
I
0.847
LOC788414
Bos taurus
ENSBTAG00000021838
I
0.796
ESRP2
Bos taurus
ENSBTAG00000004375
I
0.758
LOC100386717
Callithrix jacchus
ENSCJAG00000000043
I
0.801
LOC100388530
Callithrix jacchus
ENSCJAG00000015709
I
0.763
ESRP1
Canis familiaris
ENSCAFG00000009305
I
0.796
ESRP2
Canis familiaris
ENSCAFG00000020320
I
0.763
ESRP1
Cavia porcellus
ENSCPOG00000012197
I
0.796
esrp2
Danio rerio
ENSDARG00000018814
I
0.824
esrp1
Danio rerio
ENSDARG00000011245
I
0.759
ESRP2
Dasypus novemcinctus
ENSDNOG00000018588
I
0.842
Esrp2
Dipodomys ordii
ENSDORG00000000665
I
0.838
ESRP2
Echinops telfairi
ENSETEG00000006068
I
0.860
ESRP1
Equus caballus
ENSECAG00000000784
I
0.796
LOC100066567
Equus caballus
ENSECAG00000017375
I
0.753
ESRP2
Erinaceus europaeus
ENSEEUG00000014033
I
0.763
ESRP1
Erinaceus europaeus
ENSEEUG00000001673
I
0.787
ESRP2
Felis catus
ENSFCAG00000010419
I
0.763
ESRP1
Felis catus
ENSFCAG00000009920
I
0.796
ESRP2_CHICK
Gallus gallus
ENSGALG00000003374
I
0.843
RBM35A
Gallus gallus
ENSGALG00000015968
I
0.782
ESRP2
Gasterosteus aculeatus
ENSGACG00000016359
N
0.793
ESRP2
Gorilla gorilla
ENSGGOG00000010150
I
0.772
ESRP1
Gorilla gorilla
ENSGGOG00000003627
I
0.801
ESRP2
Homo sapiens
ENSG00000103067
D
0.772
ESRP1
Homo sapiens
ENSG00000104413
I
0.801
ESRP1
Loxodonta africana
ENSLAFG00000001498
I
0.796
ESRP2
Loxodonta africana
ENSLAFG00000014609
I
0.837
ESRP2
Macaca mulatta
ENSMMUG00000021846
I
0.763
ESRP1
Macaca mulatta
ENSMMUG00000021112
I
0.792
ESRP2
Macropus eugenii
ENSMEUG00000014322
I
0.949
ESRP2
Meleagris gallopavo
ENSMGAG00000003943
I
0.843
ESRP1
Meleagris gallopavo
ENSMGAG00000012042
I
0.769
ESRP1
Microcebus murinus
ENSMICG00000008757
I
0.796
ESRP2
Microcebus murinus
ENSMICG00000011382
I
0.753
ESRP1
Monodelphis domestica
ENSMODG00000007268
I
0.792
Esrp1
Mus musculus
ENSMUSG00000040728
I
0.787
Esrp2
Mus musculus
ENSMUSG00000084128
I
0.758
ESRP2
Myotis lucifugus
ENSMLUG00000005934
I
0.843
ESRP2
Ochotona princeps
ENSOPRG00000013401
I
0.829
ESRP2
Ornithorhynchus anatinus
ENSOANG00000010972
I
0.856
ESRP1
Ornithorhynchus anatinus
ENSOANG00000004746
I
0.796
ESRP1
Oryctolagus cuniculus
ENSOCUG00000001316
I
0.801
ESRP2
Oryctolagus cuniculus
ENSOCUG00000001242
I
0.763
ESRP1
Pan troglodytes
ENSPTRG00000020430
I
0.801
ESRP2
Pan troglodytes
ENSPTRG00000008261
I
0.767
ENSPPYG00000007484
Pongo pygmaeus
ENSPPYG00000007484
I
0.767
ENSPPYG00000018753
Pongo pygmaeus
ENSPPYG00000018753
I
0.801
ESRP2
Procavia capensis
ENSPCAG00000005215
I
0.847
ESRP1
Pteropus vampyrus
ENSPVAG00000014513
I
0.796
ESRP2
Pteropus vampyrus
ENSPVAG00000016626
I
0.718
RGD1560481
Rattus norvegicus
ENSRNOG00000008184
I
0.792
Esrp2
Rattus norvegicus
ENSRNOG00000023177
I
0.838
ESRP2
Sorex araneus
ENSSARG00000014176
I
0.838
ESRP1
Sus scrofa
ENSSSCG00000006099
I
0.796
RBM35A
Taeniopygia guttata
ENSTGUG00000011907
I
0.778
RBM35B
Taeniopygia guttata
ENSTGUG00000006986
I
0.838
ESRP1
Takifugu rubripes
ENSTRUG00000009287
N
0.716
ESRP1
Tarsius syrichta
ENSTSYG00000006036
I
0.796
ESRP1
Tetraodon nigroviridis
ENSTNIG00000018367
N
0.725
ESRP1
Tursiops truncatus
ENSTTRG00000004226
I
0.792
ESRP2
Tursiops truncatus
ENSTTRG00000014613
I
0.753
ESRP1
Vicugna pacos
ENSVPAG00000006566
I
0.796
AAH44002
Xenopus laevis
AAH44002
I
0.787
Q7ZY29
Xenopus laevis
Q7ZY29
I
0.787
esrp1
Xenopus tropicalis
ENSXETG00000014667
I
0.787