ENSPPYG00000018753 (Pongo pygmaeus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSPPYG00000018753 T40593_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ESRP2
M141_0.6 		Homo sapiens UGGGRAD RNAcompete
Ray et al.(2013)
RNCMPT00150 		0.731
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPPYP00000021034 RRM 272 341
ENSPPYP00000021034 RRM 373 445
ENSPPYP00000021034 RRM 492 564

Links

Other RRM family RBPs
Other Pongo pygmaeus RBPs

73 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002867517.1 Arabidopsis lyrata fgenesh2_kg.7__1597__AT4G26480.1 N 0.000
XM_002864390.1 Arabidopsis lyrata fgenesh2_kg.8__1516__AT5G56140.1 N 0.000
XM_002892469.1 Arabidopsis lyrata fgenesh2_kg.1__1021__AT1G09660.1 N 0.000
AT1G09660 Arabidopsis thaliana AT1G09660-TAIR-G N 0.000
AT5G56140 Arabidopsis thaliana AT5G56140-TAIR-G N 0.000
AT4G26480 Arabidopsis thaliana AT4G26480-TAIR-G N 0.000
BRADI2G57220 Brachypodium distachyon BRADI2G57220 N 0.000
Cucsa.114230 Cucumis sativus Cucsa.114230 N 0.000
chr6.LjT09E22.140.nd Lotus japonicus chr6.LjT09E22.140.nd N 0.000
MDP0000300654 Malus x domestica MDP0000300654 N 0.000
MDP0000077749 Malus x domestica MDP0000077749 N 0.000
MDP0000306088 Malus x domestica MDP0000306088 N 0.000
cassava412.valid.m1 Manihot esculenta cassava412.valid.m1 N 0.000
cassava411.valid.m1 Manihot esculenta cassava411.valid.m1 N 0.000
cassava410.valid.m1 Manihot esculenta cassava410.valid.m1 N 0.000
cassava13904.valid.m1 Manihot esculenta cassava13904.valid.m1 N 0.000
cassava13307.valid.m1 Manihot esculenta cassava13307.valid.m1 N 0.000
cassava13306.valid.m1 Manihot esculenta cassava13306.valid.m1 N 0.000
Medtr2g005410 Medicago truncatula Medtr2g005410 N 0.000
Medtr3g016780 Medicago truncatula Medtr3g016780 N 0.000
BGIOSIBCE019075 Oryza indica BGIOSIBCE019075 N 0.000
BGIOSIBCE004530 Oryza indica BGIOSIBCE004530 N 0.000
LOC_Os01g66300 Oryza sativa LOC_Os01g66300 N 0.000
LOC_Os05g34670 Oryza sativa LOC_Os05g34670 N 0.000
estExt_Genewise1.C_2260018 Physcomitrella patens estExt_Genewise1.C_2260018 N 0.000
estExt_fgenesh1_pm.C_2690009 Physcomitrella patens estExt_fgenesh1_pm.C_2690009 N 0.000
ppa009432m Prunus persica ppa009432m N 0.000
e_gw1.23.297.1 Selaginella moellendorfii e_gw1.23.297.1 N 0.000
SB03G042090 Sorghum bicolor Sb03g042090 N 0.000
GRMZM2G092182 Zea mays GRMZM2G092182 N 0.000
GRMZM2G125531 Zea mays GRMZM2G125531 N 0.000