XR_022443.1 (Pan troglodytes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSPTRG00000018106 T40757_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Rbp1
M336_0.6 		Drosophila melanogaster Sequence logo not available AUCYNNA SELEX
Cook et al.(2011)
804_7664738.1 		0.712
Rbp1
M335_0.6 		Drosophila melanogaster Sequence logo not available DCADCUUUA SELEX
Cook et al.(2011)
804_7664738 		0.712
Rbp1-like
M121_0.6 		Drosophila melanogaster AUCADCR RNAcompete
Ray et al.(2013)
RNCMPT00127 		0.712
Rbp1
M056_0.6 		Drosophila melanogaster WCAACRR RNAcompete
Ray et al.(2013)
RNCMPT00058 		0.712
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000030931 RRM 12 77
ENSPTRP00000050212 RRM 12 77

Links

Other RRM family RBPs
Other Pan troglodytes RBPs

80 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh1_pg.00771_#_298 Aspergillus carbonarius fgenesh1_pg.00771_#_298 N 0.000
ACLA_093160 Aspergillus clavatus CADACLAG00008305 N 0.000
AFLA_042700 Aspergillus flavus CADAFLAG00005597 N 0.000
AFUA_2G01820 Aspergillus fumigatus CADAFUAG00003778 N 0.000
ANIA_10574 Aspergillus nidulans CADANIAG00005779 N 0.000
AO090011000439 Aspergillus oryzae CADAORAG00005193 N 0.000
ATEG_05757 Aspergillus terreus CADATEAG00002080 N 0.000
NFIA_034170 Neosartorya fischeri CADNFIAG00003174 N 0.000