AO090011000439 (Aspergillus oryzae)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CADAORAG00005193 T33681_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CADAORAP00005100 RRM 580 646
CADAORAP00005100 RRM 655 720
CADAORAP00005100 RRM 746 814
CADAORAP00005100 RRM 865 930

Links

Other RRM family RBPs
Other Aspergillus oryzae RBPs

8 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AFLA_042700 Aspergillus flavus CADAFLAG00005597 N 1.000
fgenesh1_pg.00771_#_298 Aspergillus carbonarius fgenesh1_pg.00771_#_298 N 0.814
ATEG_05757 Aspergillus terreus CADATEAG00002080 N 0.811
An07g05350 Aspergillus niger CADANGAG00005807 N 0.807
ANIA_10574 Aspergillus nidulans CADANIAG00005779 N 0.799
ACLA_093160 Aspergillus clavatus CADACLAG00008305 N 0.799
NFIA_034170 Neosartorya fischeri CADNFIAG00003174 N 0.788
AFUA_2G01820 Aspergillus fumigatus CADAFUAG00003778 N 0.777