CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ESRP1
(
Takifugu rubripes
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSTRUG00000009287
T42285_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTRUP00000023345
RRM
245
314
IRARGLPWQSSDQDIARFFRGLNIAKGGVALCLNAQGRRNGEALVRFINEEHRDLALQRHKHHMGNRYIE
ENSTRUP00000023345
RRM
346
424
VRMRGLPFTATHEQVLSFFSPGEGLKETCPISGGQDGILFVRYPDGRPTGDAFVLFACEEHAQCALRKHKEILGRRYIE
ENSTRUP00000023345
RRM
473
543
LRLRGLPYTASIEDILNFLGEFTQDVRQHGVHMVLNQQGRPSGDCFIQMTSLERALQASQRLHKQVMFSQR
ENSTRUP00000023346
RRM
234
303
IRARGLPWQSSDQDIARFFRGLNIAKGGVALCLNAQGRRNGEALVRFINEEHRDLALQRHKHHMGNRYIE
ENSTRUP00000023346
RRM
335
413
VRMRGLPFTATHEQVLSFFSPGEGLKETCPISGGQDGILFVRYPDGRPTGDAFVLFACEEHAQCALRKHKEILGRRYIE
ENSTRUP00000023346
RRM
462
532
LRLRGLPYTASIEDILNFLGEFTQDVRQHGVHMVLNQQGRPSGDCFIQMTSLERALQASQRLHKQVMFSQR
Links
Other
RRM
family RBPs
Other
Takifugu rubripes
RBPs
53 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R015210
Ailuropoda melanoleuca
Ame_R015210
I
0.752
ESRP1
Anolis carolinensis
ENSACAG00000003748
I
0.748
ESRP2
Anolis carolinensis
ENSACAG00000009900
I
0.730
LOC788414
Bos taurus
ENSBTAG00000021838
I
0.752
LOC100386717
Callithrix jacchus
ENSCJAG00000000043
I
0.759
ESRP1
Canis familiaris
ENSCAFG00000009305
I
0.752
ESRP1
Cavia porcellus
ENSCPOG00000012197
I
0.757
esrp2
Danio rerio
ENSDARG00000018814
I
0.739
esrp1
Danio rerio
ENSDARG00000011245
I
0.761
ESRP2
Dasypus novemcinctus
ENSDNOG00000018588
I
0.721
Esrp2
Dipodomys ordii
ENSDORG00000000665
I
0.716
ESRP2
Echinops telfairi
ENSETEG00000006068
I
0.725
ESRP1
Equus caballus
ENSECAG00000000784
I
0.752
ESRP1
Erinaceus europaeus
ENSEEUG00000001673
I
0.739
ESRP1
Felis catus
ENSFCAG00000009920
I
0.752
ESRP2_CHICK
Gallus gallus
ENSGALG00000003374
I
0.730
RBM35A
Gallus gallus
ENSGALG00000015968
I
0.748
ESRP2
Gasterosteus aculeatus
ENSGACG00000016359
N
0.713
ESRP1
Gorilla gorilla
ENSGGOG00000003627
I
0.757
ESRP1
Homo sapiens
ENSG00000104413
I
0.757
ESRP1
Loxodonta africana
ENSLAFG00000001498
I
0.757
ESRP2
Loxodonta africana
ENSLAFG00000014609
I
0.721
ESRP1
Macaca mulatta
ENSMMUG00000021112
I
0.760
ESRP2
Macropus eugenii
ENSMEUG00000014322
I
0.752
ESRP1
Meleagris gallopavo
ENSMGAG00000012042
I
0.748
ESRP2
Meleagris gallopavo
ENSMGAG00000003943
I
0.730
ESRP1
Microcebus murinus
ENSMICG00000008757
I
0.757
ESRP2
Monodelphis domestica
ENSMODG00000005183
I
0.716
ESRP1
Monodelphis domestica
ENSMODG00000007268
I
0.757
Esrp1
Mus musculus
ENSMUSG00000040728
I
0.761
ESRP2
Myotis lucifugus
ENSMLUG00000005934
I
0.734
ESRP2
Ochotona princeps
ENSOPRG00000013401
I
0.721
ESRP2
Ornithorhynchus anatinus
ENSOANG00000010972
I
0.730
ESRP1
Ornithorhynchus anatinus
ENSOANG00000004746
I
0.757
ESRP1
Oryctolagus cuniculus
ENSOCUG00000001316
I
0.757
ESRP1
Pan troglodytes
ENSPTRG00000020430
I
0.757
ENSPPYG00000018753
Pongo pygmaeus
ENSPPYG00000018753
I
0.757
ESRP2
Procavia capensis
ENSPCAG00000005215
I
0.734
ESRP1
Pteropus vampyrus
ENSPVAG00000014513
I
0.752
Esrp2
Rattus norvegicus
ENSRNOG00000023177
I
0.725
RGD1560481
Rattus norvegicus
ENSRNOG00000008184
I
0.757
ESRP2
Sorex araneus
ENSSARG00000014176
I
0.725
ESRP1
Sus scrofa
ENSSSCG00000006099
I
0.752
RBM35B
Taeniopygia guttata
ENSTGUG00000006986
I
0.721
RBM35A
Taeniopygia guttata
ENSTGUG00000011907
I
0.743
ESRP1
Tarsius syrichta
ENSTSYG00000006036
I
0.766
ESRP1
Tetraodon nigroviridis
ENSTNIG00000018367
N
0.941
ESRP1
Tursiops truncatus
ENSTTRG00000004226
I
0.752
ESRP1
Vicugna pacos
ENSVPAG00000006566
I
0.757
AAH44002
Xenopus laevis
AAH44002
I
0.761
Q7ZY29
Xenopus laevis
Q7ZY29
I
0.761
esrp1
Xenopus tropicalis
ENSXETG00000014667
I
0.761