SLTM (Takifugu rubripes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTRUG00000017767 T42379_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000045539 RRM 340 410
ENSTRUP00000045540 RRM 338 408
ENSTRUP00000045541 RRM 205 275
ENSTRUP00000045542 RRM 29 99

Links

Other RRM family RBPs
Other Takifugu rubripes RBPs

59 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL012456 Aedes aegypti AAEL012456 N 0.000
Ame_R007986 Ailuropoda melanoleuca Ame_R007986 N 0.000
UNK Anolis carolinensis ENSACAG00000007303 N 0.000
AGAP000684 Anopheles gambiae AGAP000684 N 0.000
A1A4K6_BOVIN Bos taurus ENSBTAG00000016287 N 0.000
e_gw.394.2.1 Branchiostoma floridae e_gw.394.2.1 N 0.000
UNKL Callithrix jacchus ENSCJAG00000013151 N 0.000
LOC100390502 Callithrix jacchus ENSCJAG00000014056 N 0.000
UNK_CANFA Canis familiaris ENSCAFG00000004925 N 0.000
UNK Cavia porcellus ENSCPOG00000012679 N 0.000
UNKL Cavia porcellus ENSCPOG00000011846 N 0.000
UNKL Danio rerio ENSDARG00000037838 N 0.000
unk Danio rerio ENSDARG00000000935 N 0.000
Unk Dipodomys ordii ENSDORG00000008133 N 0.000
LOC100067623 Equus caballus ENSECAG00000010641 N 0.000
UNK Equus caballus ENSECAG00000024672 N 0.000
UNK Felis catus ENSFCAG00000005757 N 0.000
UNK Gallus gallus ENSGALG00000002278 N 0.000
UNKL Gallus gallus ENSGALG00000006450 N 0.000
UNK Gasterosteus aculeatus ENSGACG00000005102 N 0.000
UNK Gorilla gorilla ENSGGOG00000009203 N 0.000
UNKL Gorilla gorilla ENSGGOG00000014915 N 0.000
UNK Homo sapiens ENSG00000132478 N 0.000
UNKL Homo sapiens ENSG00000059145 N 0.000
estExt_Genewise1.C_sca_750115 Lottia gigantea estExt_Genewise1.C_sca_750115 N 0.000
UNK Loxodonta africana ENSLAFG00000022662 N 0.000
UNKL Loxodonta africana ENSLAFG00000018262 N 0.000
UNK Macaca mulatta ENSMMUG00000013646 N 0.000
UNK Macropus eugenii ENSMEUG00000004094 N 0.000
UNK Meleagris gallopavo ENSMGAG00000004713 N 0.000
UNKL Meleagris gallopavo ENSMGAG00000006920 N 0.000
UNK Monodelphis domestica ENSMODG00000007684 N 0.000
UNKL Monodelphis domestica ENSMODG00000016188 N 0.000
Unkl Mus musculus ENSMUSG00000015127 N 0.000
Unk Mus musculus ENSMUSG00000020770 N 0.000
UNK Myotis lucifugus ENSMLUG00000015453 N 0.000
UNK Ochotona princeps ENSOPRG00000012784 N 0.000
SNAPOd2T00019464001 Oikopleura dioica SNAPOd2T00019464001 N 0.000
UNK Oryctolagus cuniculus ENSOCUG00000014994 N 0.000
UNKL Oryzias latipes ENSORLG00000005070 N 0.000
UNK Pan troglodytes ENSPTRG00000009656 N 0.000
PHUM219250 Pediculus humanus PHUM219250 N 0.000
ENSPPYG00000008637 Pongo pygmaeus ENSPPYG00000008637 N 0.000
ENSPPYG00000006950 Pongo pygmaeus ENSPPYG00000006950 N 0.000
UNK Procavia capensis ENSPCAG00000004504 N 0.000
UNK Pteropus vampyrus ENSPVAG00000008460 N 0.000
D4A564_RAT Rattus norvegicus ENSRNOG00000006600 N 0.000
RGD1565247 Rattus norvegicus ENSRNOG00000017598 N 0.000
UNK Spermophilus tridecemlineatus ENSSTOG00000013344 N 0.000
UNK Sus scrofa ENSSSCG00000017201 N 0.000
UNK Taeniopygia guttata ENSTGUG00000008279 N 0.000
UNK Takifugu rubripes ENSTRUG00000007192 N 0.000
UNKL Takifugu rubripes ENSTRUG00000012086 N 0.000
UNKL Tetraodon nigroviridis ENSTNIG00000018588 N 0.000
UNK Tursiops truncatus ENSTTRG00000015890 N 0.000
AAH46725 Xenopus laevis AAH46725 N 0.000
unk Xenopus tropicalis ENSXETG00000012578 N 0.000