SLTM (Gallus gallus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSGALG00000004192 T37633_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000006652 RRM 336 406

Links

Other RRM family RBPs
Other Gallus gallus RBPs

115 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SLTM Meleagris gallopavo ENSMGAG00000005313 N 1.000
SLTM Taeniopygia guttata ENSTGUG00000006017 N 1.000
XM_001377567.1 Monodelphis domestica ENSMODG00000008794 N 0.986
SLTM Ornithorhynchus anatinus ENSOANG00000012311 N 0.986
SLTM Anolis carolinensis ENSACAG00000015120 N 0.958
Sltm Dipodomys ordii ENSDORG00000007463 N 0.958
Ame_R015170 Ailuropoda melanoleuca Ame_R015170 N 0.944
AAI00172 Xenopus laevis AAI00172 N 0.944
ENSPPYG00000006515 Pongo pygmaeus ENSPPYG00000006515 N 0.944
Q498L2 Xenopus laevis Q498L2 N 0.944
Sltm Rattus norvegicus ENSRNOG00000013708 N 0.944
SLTM Oryctolagus cuniculus ENSOCUG00000003327 N 0.944
SLTM Vicugna pacos ENSVPAG00000008606 N 0.944
sltm Xenopus tropicalis ENSXETG00000010840 N 0.944
LOC100068259 Equus caballus ENSECAG00000011267 N 0.944
SLTM Dasypus novemcinctus ENSDNOG00000002975 N 0.944
SLTM Pan troglodytes ENSPTRG00000007121 N 0.944
SLTM Bos taurus ENSBTAG00000011319 N 0.944
SLTM Macaca mulatta ENSMMUG00000022200 N 0.944
SLTM Pteropus vampyrus ENSPVAG00000015056 N 0.944
SLTM Homo sapiens ENSG00000137776 N 0.944
SLTM Tupaia belangeri ENSTBEG00000000945 N 0.944
SLTM Echinops telfairi ENSETEG00000008003 N 0.944
SLTM Canis familiaris ENSCAFG00000016586 N 0.944
SLTM Tursiops truncatus ENSTTRG00000005246 N 0.944
SLTM Felis catus ENSFCAG00000004826 N 0.930
SLTM Loxodonta africana ENSLAFG00000017922 N 0.930
SLTM Otolemur garnettii ENSOGAG00000011297 N 0.930
ENSSSCG00000004591 Sus scrofa ENSSSCG00000004591 N 0.930
Sltm Mus musculus ENSMUSG00000032212 N 0.930
SLTM Microcebus murinus ENSMICG00000013069 N 0.930
ENSSSCG00000004592 Sus scrofa ENSSSCG00000004592 N 0.930
SLTM Cavia porcellus ENSCPOG00000026109 N 0.930
SLTM Callithrix jacchus ENSCJAG00000020395 N 0.930
SLTM Choloepus hoffmanni ENSCHOG00000001125 N 0.915
ENSDARG00000017150 Danio rerio ENSDARG00000017150 N 0.915
SLTM Erinaceus europaeus ENSEEUG00000000580 N 0.873
SLTM Oryzias latipes ENSORLG00000008161 N 0.873
SLTM Gasterosteus aculeatus ENSGACG00000015814 N 0.845
SLTM Takifugu rubripes ENSTRUG00000017767 N 0.817
ENSACAG00000016893 Anolis carolinensis ENSACAG00000016893 N 0.817
SLTM Tetraodon nigroviridis ENSTNIG00000009334 N 0.803
estExt_fgenesh2_pg.C_3630023 Branchiostoma floridae estExt_fgenesh2_pg.C_3630023 N 0.803
estExt_fgenesh2_pg.C_4200008 Branchiostoma floridae estExt_fgenesh2_pg.C_4200008 N 0.803
SAFB2 Callithrix jacchus ENSCJAG00000017205 N 0.789
SAFB2 Bos taurus ENSBTAG00000001790 N 0.789
SAFB2 Canis familiaris ENSCAFG00000018814 N 0.789
LOC100064922 Equus caballus ENSECAG00000018978 N 0.789
Safb2 Dipodomys ordii ENSDORG00000016199 N 0.789
SAFB2 Tursiops truncatus ENSTTRG00000013585 N 0.789
SAFB2 Sorex araneus ENSSARG00000000649 N 0.789
SAFB2 Otolemur garnettii ENSOGAG00000006855 N 0.789
SAFB2 Myotis lucifugus ENSMLUG00000001050 N 0.789
ENSMGAG00000001051 Meleagris gallopavo ENSMGAG00000001051 N 0.789
SAFB2 Felis catus ENSFCAG00000011834 N 0.789
ENSOANG00000013644 Ornithorhynchus anatinus ENSOANG00000013644 N 0.789
SAFB2 Homo sapiens ENSG00000130254 N 0.789
SAFB-1 Taeniopygia guttata ENSTGUG00000000489 N 0.789
SAFB2 Macaca mulatta ENSMMUG00000017968 N 0.789
SAFB2 Procavia capensis ENSPCAG00000006352 N 0.789
ENSPPYG00000009427 Pongo pygmaeus ENSPPYG00000009427 N 0.789
SAFB2 Gorilla gorilla ENSGGOG00000015093 N 0.789
ENSSSCG00000013523 Sus scrofa ENSSSCG00000013523 N 0.789
SAFB2 Spermophilus tridecemlineatus ENSSTOG00000002758 N 0.789
SAFB2 Gallus gallus ENSGALG00000001948 N 0.789
SAFB2 Echinops telfairi ENSETEG00000016756 N 0.789
SAFB2 Pan troglodytes ENSPTRG00000010334 N 0.789
SAFB2 Loxodonta africana ENSLAFG00000003836 N 0.789
SAFB2 Monodelphis domestica ENSMODG00000001178 N 0.789
SAFB2 Macropus eugenii ENSMEUG00000002456 N 0.775
safb Danio rerio ENSDARG00000020467 N 0.775
Ame_R016388 Ailuropoda melanoleuca Ame_R016388 N 0.775
Safb2 Mus musculus ENSMUSG00000042625 N 0.775
LOC787645 Bos taurus ENSBTAG00000035584 N 0.761
SAFB Takifugu rubripes ENSTRUG00000003567 N 0.761
ENSTNIG00000015470 Tetraodon nigroviridis ENSTNIG00000015470 N 0.761
ENSMODG00000001236 Monodelphis domestica ENSMODG00000001236 N 0.761
SAFB2 Cavia porcellus ENSCPOG00000011394 N 0.761
SAFB Gasterosteus aculeatus ENSGACG00000011385 N 0.761
SAFB2 Oryctolagus cuniculus ENSOCUG00000001592 N 0.761
SAFB Oryzias latipes ENSORLG00000016989 N 0.761
SAFB Felis catus ENSFCAG00000011835 N 0.746
SAFB Dasypus novemcinctus ENSDNOG00000015746 N 0.746
LOC100064953 Equus caballus ENSECAG00000018659 N 0.746
SAFB Echinops telfairi ENSETEG00000018679 N 0.746
SAFB Cavia porcellus ENSCPOG00000026322 N 0.746
Safb Dipodomys ordii ENSDORG00000016200 N 0.746
SAFB Homo sapiens ENSG00000160633 N 0.746
SAFB Tarsius syrichta ENSTSYG00000001851 N 0.746
SAFB Sorex araneus ENSSARG00000010475 N 0.746
SAFB Callithrix jacchus ENSCJAG00000017081 N 0.746
SAFB Microcebus murinus ENSMICG00000008739 N 0.746
SAFB Pteropus vampyrus ENSPVAG00000004913 N 0.746
SAFB Myotis lucifugus ENSMLUG00000001081 N 0.746
SAFB Oryctolagus cuniculus ENSOCUG00000014628 N 0.746
SAFB Macaca mulatta ENSMMUG00000017970 N 0.746
ENSPPYG00000009428 Pongo pygmaeus ENSPPYG00000009428 N 0.746
SAFB Tursiops truncatus ENSTTRG00000013588 N 0.746
SAFB Vicugna pacos ENSVPAG00000012043 N 0.746
ENSBTAG00000007875 Bos taurus ENSBTAG00000007875 N 0.746
A7E314_BOVIN Bos taurus ENSBTAG00000035585 N 0.746
SAFB Canis familiaris ENSCAFG00000018803 N 0.746
SAFB Gorilla gorilla ENSGGOG00000015109 N 0.746
amel4_ncbi_hmm13354 Apis mellifera amel4_ncbi_hmm13354 N 0.746
SAFB Loxodonta africana ENSLAFG00000003840 N 0.746
Ame_R016389 Ailuropoda melanoleuca Ame_R016389 N 0.746
ENSMGAG00000001101 Meleagris gallopavo ENSMGAG00000001101 N 0.732
Safb Mus musculus ENSMUSG00000071054 N 0.732
SAFB-2 Taeniopygia guttata ENSTGUG00000000502 N 0.732
SAFB Ochotona princeps ENSOPRG00000011561 N 0.732
SAFB2 Gallus gallus ENSGALG00000013365 N 0.732
SAFB Pan troglodytes ENSPTRG00000010335 N 0.732
ENSACAG00000016928 Anolis carolinensis ENSACAG00000016928 N 0.718
168846 Helobdella robusta 168846 N 0.718
fgenesh1_pm.C_scaffold_151000005 Capitella teleta fgenesh1_pm.C_scaffold_151000005 N 0.718