CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSACAG00000016893
(
Anolis carolinensis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSACAG00000016893
T34741_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSACAP00000016648
RRM
7
77
LWVSGLSSSTRATDLKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSSSDEATKCIAHLHRTELHGKMIS
Links
Other
RRM
family RBPs
Other
Anolis carolinensis
RBPs
136 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
SAFB2
Gallus gallus
ENSGALG00000001948
N
0.958
SAFB-1
Taeniopygia guttata
ENSTGUG00000000489
N
0.958
ENSMGAG00000001051
Meleagris gallopavo
ENSMGAG00000001051
N
0.958
SAFB2
Otolemur garnettii
ENSOGAG00000006855
N
0.944
SAFB2
Echinops telfairi
ENSETEG00000016756
N
0.944
LOC100064922
Equus caballus
ENSECAG00000018978
N
0.944
SAFB2
Homo sapiens
ENSG00000130254
N
0.944
SAFB2
Pan troglodytes
ENSPTRG00000010334
N
0.944
SAFB2
Macaca mulatta
ENSMMUG00000017968
N
0.944
SAFB2
Loxodonta africana
ENSLAFG00000003836
N
0.944
SAFB2
Gorilla gorilla
ENSGGOG00000015093
N
0.944
SAFB2
Myotis lucifugus
ENSMLUG00000001050
N
0.944
ENSSSCG00000013523
Sus scrofa
ENSSSCG00000013523
N
0.944
SAFB2
Monodelphis domestica
ENSMODG00000001178
N
0.944
ENSPPYG00000009427
Pongo pygmaeus
ENSPPYG00000009427
N
0.944
SAFB2
Spermophilus tridecemlineatus
ENSSTOG00000002758
N
0.944
SAFB2
Callithrix jacchus
ENSCJAG00000017205
N
0.944
SAFB2
Tursiops truncatus
ENSTTRG00000013585
N
0.944
SAFB2
Bos taurus
ENSBTAG00000001790
N
0.944
SAFB2
Felis catus
ENSFCAG00000011834
N
0.930
SAFB
Gasterosteus aculeatus
ENSGACG00000011385
N
0.930
SAFB2
Procavia capensis
ENSPCAG00000006352
N
0.930
SAFB2
Canis familiaris
ENSCAFG00000018814
N
0.930
ENSOANG00000013644
Ornithorhynchus anatinus
ENSOANG00000013644
N
0.930
Safb2
Dipodomys ordii
ENSDORG00000016199
N
0.930
SAFB2
Sorex araneus
ENSSARG00000000649
N
0.930
SAFB2
Macropus eugenii
ENSMEUG00000002456
N
0.915
Ame_R016388
Ailuropoda melanoleuca
Ame_R016388
N
0.915
SAFB
Oryzias latipes
ENSORLG00000016989
N
0.915
ENSTNIG00000015470
Tetraodon nigroviridis
ENSTNIG00000015470
N
0.915
safb
Danio rerio
ENSDARG00000020467
N
0.915
SAFB2
Oryctolagus cuniculus
ENSOCUG00000001592
N
0.915
SAFB
Takifugu rubripes
ENSTRUG00000003567
N
0.915
SAFB
Myotis lucifugus
ENSMLUG00000001081
N
0.901
SAFB
Vicugna pacos
ENSVPAG00000012043
N
0.901
Ame_R016389
Ailuropoda melanoleuca
Ame_R016389
N
0.901
SAFB
Tursiops truncatus
ENSTTRG00000013588
N
0.901
SAFB
Microcebus murinus
ENSMICG00000008739
N
0.901
SAFB
Tarsius syrichta
ENSTSYG00000001851
N
0.901
Safb2
Mus musculus
ENSMUSG00000042625
N
0.901
SAFB
Sorex araneus
ENSSARG00000010475
N
0.901
ENSMODG00000001236
Monodelphis domestica
ENSMODG00000001236
N
0.901
ENSPPYG00000009428
Pongo pygmaeus
ENSPPYG00000009428
N
0.901
SAFB
Macaca mulatta
ENSMMUG00000017970
N
0.901
SAFB
Pteropus vampyrus
ENSPVAG00000004913
N
0.901
SAFB
Oryctolagus cuniculus
ENSOCUG00000014628
N
0.901
SAFB
Homo sapiens
ENSG00000160633
N
0.901
ENSBTAG00000007875
Bos taurus
ENSBTAG00000007875
N
0.901
SAFB
Callithrix jacchus
ENSCJAG00000017081
N
0.901
SAFB
Canis familiaris
ENSCAFG00000018803
N
0.901
SAFB
Felis catus
ENSFCAG00000011835
N
0.901
SAFB
Dasypus novemcinctus
ENSDNOG00000015746
N
0.901
SAFB2
Cavia porcellus
ENSCPOG00000011394
N
0.901
A7E314_BOVIN
Bos taurus
ENSBTAG00000035585
N
0.901
Safb
Dipodomys ordii
ENSDORG00000016200
N
0.901
SAFB
Cavia porcellus
ENSCPOG00000026322
N
0.901
SAFB
Gorilla gorilla
ENSGGOG00000015109
N
0.901
LOC100064953
Equus caballus
ENSECAG00000018659
N
0.901
SAFB
Echinops telfairi
ENSETEG00000018679
N
0.901
SAFB
Ochotona princeps
ENSOPRG00000011561
N
0.887
SAFB
Pan troglodytes
ENSPTRG00000010335
N
0.887
Safb
Mus musculus
ENSMUSG00000071054
N
0.887
estExt_fgenesh2_pg.C_3630023
Branchiostoma floridae
estExt_fgenesh2_pg.C_3630023
N
0.887
LOC787645
Bos taurus
ENSBTAG00000035584
N
0.887
SAFB
Loxodonta africana
ENSLAFG00000003840
N
0.887
estExt_fgenesh2_pg.C_4200008
Branchiostoma floridae
estExt_fgenesh2_pg.C_4200008
N
0.887
SAFB2
Gallus gallus
ENSGALG00000013365
N
0.873
ENSMGAG00000001101
Meleagris gallopavo
ENSMGAG00000001101
N
0.873
SAFB-2
Taeniopygia guttata
ENSTGUG00000000502
N
0.873
fgenesh1_pm.C_scaffold_151000005
Capitella teleta
fgenesh1_pm.C_scaffold_151000005
N
0.859
ENSACAG00000016928
Anolis carolinensis
ENSACAG00000016928
N
0.845
amel4_ncbi_hmm13354
Apis mellifera
amel4_ncbi_hmm13354
N
0.831
SLTM
Gallus gallus
ENSGALG00000004192
N
0.817
SLTM
Meleagris gallopavo
ENSMGAG00000005313
N
0.817
SLTM
Taeniopygia guttata
ENSTGUG00000006017
N
0.817
estExt_fgenesh2_pg.C_sca_50258
Lottia gigantea
estExt_fgenesh2_pg.C_sca_50258
N
0.803
SLTM
Callithrix jacchus
ENSCJAG00000020395
N
0.803
XM_001377567.1
Monodelphis domestica
ENSMODG00000008794
N
0.803
SLTM
Ornithorhynchus anatinus
ENSOANG00000012311
N
0.803
SLTM
Echinops telfairi
ENSETEG00000008003
N
0.803
Sltm
Dipodomys ordii
ENSDORG00000007463
N
0.803
SLTM
Vicugna pacos
ENSVPAG00000008606
N
0.789
SLTM
Tursiops truncatus
ENSTTRG00000005246
N
0.789
AAEL001352
Aedes aegypti
AAEL001352
N
0.789
Ame_R015170
Ailuropoda melanoleuca
Ame_R015170
N
0.789
nasonia_NCBI_hmm598374
Nasonia vitripennis
nasonia_NCBI_hmm598374
N
0.789
SLTM
Macaca mulatta
ENSMMUG00000022200
N
0.789
SLTM
Homo sapiens
ENSG00000137776
N
0.789
SLTM
Bos taurus
ENSBTAG00000011319
N
0.789
SLTM
Oryctolagus cuniculus
ENSOCUG00000003327
N
0.789
SLTM
Pan troglodytes
ENSPTRG00000007121
N
0.789
SLTM
Canis familiaris
ENSCAFG00000016586
N
0.789
Sltm
Rattus norvegicus
ENSRNOG00000013708
N
0.789
SLTM
Pteropus vampyrus
ENSPVAG00000015056
N
0.789
SLTM
Dasypus novemcinctus
ENSDNOG00000002975
N
0.789
ENSPPYG00000006515
Pongo pygmaeus
ENSPPYG00000006515
N
0.789
SLTM
Tupaia belangeri
ENSTBEG00000000945
N
0.789
LOC100068259
Equus caballus
ENSECAG00000011267
N
0.789
CpipJ_CPIJ012814
Culex pipiens
CpipJ_CPIJ012814
N
0.775
SLTM
Microcebus murinus
ENSMICG00000013069
N
0.775
SLTM
Otolemur garnettii
ENSOGAG00000011297
N
0.775
Q498L2
Xenopus laevis
Q498L2
N
0.775
AAI00172
Xenopus laevis
AAI00172
N
0.775
Sltm
Mus musculus
ENSMUSG00000032212
N
0.775
SLTM
Loxodonta africana
ENSLAFG00000017922
N
0.775
SLTM
Anolis carolinensis
ENSACAG00000015120
N
0.775
ENSDARG00000017150
Danio rerio
ENSDARG00000017150
N
0.775
SLTM
Felis catus
ENSFCAG00000004826
N
0.775
ENSSSCG00000004592
Sus scrofa
ENSSSCG00000004592
N
0.775
SLTM
Cavia porcellus
ENSCPOG00000026109
N
0.775
SLTM
Erinaceus europaeus
ENSEEUG00000000580
N
0.775
sltm
Xenopus tropicalis
ENSXETG00000010840
N
0.775
CPIJ012814
Culex quinquefasciatus
CPIJ012814
N
0.775
ENSSSCG00000004591
Sus scrofa
ENSSSCG00000004591
N
0.775
168846
Helobdella robusta
168846
N
0.761
SLTM
Choloepus hoffmanni
ENSCHOG00000001125
N
0.761
AGAP001298
Anopheles gambiae
AGAP001298
N
0.761
PHUM451590
Pediculus humanus
PHUM451590
N
0.761
DGIL_AUG5s7140g4t1
Acyrtosiphon pisum
DGIL_AUG5s7140g4t1
N
0.746
SLTM
Oryzias latipes
ENSORLG00000008161
N
0.746
DGIL_AUG5s8592g2t1
Acyrtosiphon pisum
DGIL_AUG5s8592g2t1
N
0.732
GH19115
Drosophila grimshawi
FBgn0126582
N
0.732
GI23570
Drosophila mojavensis
FBgn0146296
N
0.732
GL13631
Drosophila persimilis
FBgn0151236
N
0.732
GG11323
Drosophila erecta
FBgn0103624
N
0.732
GF16243
Drosophila ananassae
FBgn0093265
N
0.732
CG6995
Drosophila melanogaster
FBgn0039229
N
0.732
GM26630
Drosophila sechellia
FBgn0181483
N
0.732
GD21133
Drosophila simulans
FBgn0192585
N
0.732
GA26852-RA
Drosophila pseudoobscura
FBgn0248225
N
0.732
GK14110
Drosophila willistoni
FBgn0216116
N
0.732
GE23518
Drosophila yakuba
FBgn0240697
N
0.732
GJ23544
Drosophila virilis
FBgn0210641
N
0.732
SLTM
Takifugu rubripes
ENSTRUG00000017767
N
0.704
SLTM
Gasterosteus aculeatus
ENSGACG00000015814
N
0.704
NCBI_GNO_7700035
Daphnia pulex
NCBI_GNO_7700035
N
0.704