SLTM (Oryzias latipes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSORLG00000008161 T40157_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000010249 RRM 359 429

Links

Other RRM family RBPs
Other Oryzias latipes RBPs

108 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SLTM Gasterosteus aculeatus ENSGACG00000015814 N 0.915
SLTM Takifugu rubripes ENSTRUG00000017767 N 0.901
ENSDARG00000017150 Danio rerio ENSDARG00000017150 N 0.887
Sltm Dipodomys ordii ENSDORG00000007463 N 0.887
SLTM Ornithorhynchus anatinus ENSOANG00000012311 N 0.887
SLTM Otolemur garnettii ENSOGAG00000011297 N 0.887
XM_001377567.1 Monodelphis domestica ENSMODG00000008794 N 0.887
SLTM Macaca mulatta ENSMMUG00000022200 N 0.873
SLTM Bos taurus ENSBTAG00000011319 N 0.873
SLTM Tetraodon nigroviridis ENSTNIG00000009334 N 0.873
SLTM Taeniopygia guttata ENSTGUG00000006017 N 0.873
LOC100068259 Equus caballus ENSECAG00000011267 N 0.873
SLTM Tursiops truncatus ENSTTRG00000005246 N 0.873
SLTM Oryctolagus cuniculus ENSOCUG00000003327 N 0.873
SLTM Canis familiaris ENSCAFG00000016586 N 0.873
Ame_R015170 Ailuropoda melanoleuca Ame_R015170 N 0.873
SLTM Echinops telfairi ENSETEG00000008003 N 0.873
SLTM Vicugna pacos ENSVPAG00000008606 N 0.873
SLTM Meleagris gallopavo ENSMGAG00000005313 N 0.873
SLTM Cavia porcellus ENSCPOG00000026109 N 0.873
SLTM Gallus gallus ENSGALG00000004192 N 0.873
SLTM Dasypus novemcinctus ENSDNOG00000002975 N 0.873
ENSPPYG00000006515 Pongo pygmaeus ENSPPYG00000006515 N 0.873
SLTM Pan troglodytes ENSPTRG00000007121 N 0.873
SLTM Pteropus vampyrus ENSPVAG00000015056 N 0.873
Sltm Rattus norvegicus ENSRNOG00000013708 N 0.873
SLTM Homo sapiens ENSG00000137776 N 0.873
SLTM Tupaia belangeri ENSTBEG00000000945 N 0.873
SLTM Callithrix jacchus ENSCJAG00000020395 N 0.859
SLTM Microcebus murinus ENSMICG00000013069 N 0.859
SLTM Anolis carolinensis ENSACAG00000015120 N 0.859
AAI00172 Xenopus laevis AAI00172 N 0.859
Q498L2 Xenopus laevis Q498L2 N 0.859
SLTM Loxodonta africana ENSLAFG00000017922 N 0.859
sltm Xenopus tropicalis ENSXETG00000010840 N 0.859
ENSSSCG00000004592 Sus scrofa ENSSSCG00000004592 N 0.859
ENSSSCG00000004591 Sus scrofa ENSSSCG00000004591 N 0.859
SLTM Felis catus ENSFCAG00000004826 N 0.859
Sltm Mus musculus ENSMUSG00000032212 N 0.859
SLTM Choloepus hoffmanni ENSCHOG00000001125 N 0.845
SLTM Erinaceus europaeus ENSEEUG00000000580 N 0.803
ENSACAG00000016893 Anolis carolinensis ENSACAG00000016893 N 0.746
Safb2 Dipodomys ordii ENSDORG00000016199 N 0.732
SAFB2 Echinops telfairi ENSETEG00000016756 N 0.732
SAFB2 Gallus gallus ENSGALG00000001948 N 0.732
SAFB2 Gorilla gorilla ENSGGOG00000015093 N 0.732
SAFB2 Loxodonta africana ENSLAFG00000003836 N 0.732
ENSMGAG00000001051 Meleagris gallopavo ENSMGAG00000001051 N 0.732
SAFB2 Homo sapiens ENSG00000130254 N 0.732
LOC100064922 Equus caballus ENSECAG00000018978 N 0.732
SAFB2 Macaca mulatta ENSMMUG00000017968 N 0.732
SAFB2 Felis catus ENSFCAG00000011834 N 0.732
SAFB2 Myotis lucifugus ENSMLUG00000001050 N 0.732
SAFB2 Bos taurus ENSBTAG00000001790 N 0.732
SAFB2 Callithrix jacchus ENSCJAG00000017205 N 0.732
SAFB2 Tursiops truncatus ENSTTRG00000013585 N 0.732
estExt_fgenesh2_pg.C_3630023 Branchiostoma floridae estExt_fgenesh2_pg.C_3630023 N 0.732
ENSOANG00000013644 Ornithorhynchus anatinus ENSOANG00000013644 N 0.732
SAFB-1 Taeniopygia guttata ENSTGUG00000000489 N 0.732
ENSSSCG00000013523 Sus scrofa ENSSSCG00000013523 N 0.732
SAFB2 Otolemur garnettii ENSOGAG00000006855 N 0.732
SAFB2 Spermophilus tridecemlineatus ENSSTOG00000002758 N 0.732
SAFB2 Sorex araneus ENSSARG00000000649 N 0.732
estExt_fgenesh2_pg.C_4200008 Branchiostoma floridae estExt_fgenesh2_pg.C_4200008 N 0.732
SAFB2 Canis familiaris ENSCAFG00000018814 N 0.732
SAFB2 Procavia capensis ENSPCAG00000006352 N 0.732
ENSPPYG00000009427 Pongo pygmaeus ENSPPYG00000009427 N 0.732
SAFB2 Monodelphis domestica ENSMODG00000001178 N 0.732
SAFB2 Pan troglodytes ENSPTRG00000010334 N 0.732
Safb2 Mus musculus ENSMUSG00000042625 N 0.718
safb Danio rerio ENSDARG00000020467 N 0.718
ENSMODG00000001236 Monodelphis domestica ENSMODG00000001236 N 0.718
ENSTNIG00000015470 Tetraodon nigroviridis ENSTNIG00000015470 N 0.718
Ame_R016388 Ailuropoda melanoleuca Ame_R016388 N 0.718
SAFB2 Macropus eugenii ENSMEUG00000002456 N 0.718
LOC787645 Bos taurus ENSBTAG00000035584 N 0.718
SAFB Microcebus murinus ENSMICG00000008739 N 0.704
SAFB Myotis lucifugus ENSMLUG00000001081 N 0.704
SAFB Macaca mulatta ENSMMUG00000017970 N 0.704
SAFB Loxodonta africana ENSLAFG00000003840 N 0.704
SAFB2 Oryctolagus cuniculus ENSOCUG00000001592 N 0.704
ENSMGAG00000001101 Meleagris gallopavo ENSMGAG00000001101 N 0.704
SAFB Oryctolagus cuniculus ENSOCUG00000014628 N 0.704
SAFB2 Cavia porcellus ENSCPOG00000011394 N 0.704
SAFB Vicugna pacos ENSVPAG00000012043 N 0.704
SAFB Tursiops truncatus ENSTTRG00000013588 N 0.704
168846 Helobdella robusta 168846 N 0.704
Ame_R016389 Ailuropoda melanoleuca Ame_R016389 N 0.704
ENSBTAG00000007875 Bos taurus ENSBTAG00000007875 N 0.704
SAFB Tarsius syrichta ENSTSYG00000001851 N 0.704
SAFB Takifugu rubripes ENSTRUG00000003567 N 0.704
ENSPPYG00000009428 Pongo pygmaeus ENSPPYG00000009428 N 0.704
SAFB Pteropus vampyrus ENSPVAG00000004913 N 0.704
SAFB Sorex araneus ENSSARG00000010475 N 0.704
SAFB-2 Taeniopygia guttata ENSTGUG00000000502 N 0.704
A7E314_BOVIN Bos taurus ENSBTAG00000035585 N 0.704
SAFB Canis familiaris ENSCAFG00000018803 N 0.704
SAFB Felis catus ENSFCAG00000011835 N 0.704
SAFB Homo sapiens ENSG00000160633 N 0.704
SAFB Gasterosteus aculeatus ENSGACG00000011385 N 0.704
SAFB2 Gallus gallus ENSGALG00000013365 N 0.704
SAFB Echinops telfairi ENSETEG00000018679 N 0.704
LOC100064953 Equus caballus ENSECAG00000018659 N 0.704
SAFB Callithrix jacchus ENSCJAG00000017081 N 0.704
SAFB Oryzias latipes ENSORLG00000016989 N 0.704
SAFB Dasypus novemcinctus ENSDNOG00000015746 N 0.704
Safb Dipodomys ordii ENSDORG00000016200 N 0.704
SAFB Gorilla gorilla ENSGGOG00000015109 N 0.704