estExt_Genewise1.C_3910068 (Physcomitrella patens)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_Genewise1.C_3910068 T51258_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
gw1.219.6.1_CONSTRUCT
M199_0.6 		RNAcompete CONSTRUCTS UGUUUUD RNAcompete
Ray et al.(2013)
RNCMPT00229 		0.990
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1.C_3910068 RRM 45 114
estExt_Genewise1.C_3910068 RRM 138 209
estExt_Genewise1.C_3910068 RRM 259 323

Links

Other RRM family RBPs
Other Physcomitrella patens RBPs

72 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
e_gw.526.41.1 Branchiostoma floridae e_gw.526.41.1 N 0.000
estExt_fgenesh2_pm.C_220017 Branchiostoma floridae estExt_fgenesh2_pm.C_220017 N 0.000
ENSLAFG00000028496 Loxodonta africana ENSLAFG00000028496 N 0.000
ENSPCAG00000003709 Procavia capensis ENSPCAG00000003709 N 0.000
XP_001189425.1 Strongylocentrotus purpuratus XP_001189425.1 N 0.000
XP_792919.2 Strongylocentrotus purpuratus XP_792919.2 N 0.000