estExt_Genewise1Plus.C_2670068 (Capitella teleta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_Genewise1Plus.C_2670068 T51435_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
PABPN1
M148_0.6 		Homo sapiens ARAAGA RNAcompete
Ray et al.(2013)
RNCMPT00157 		0.843
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1Plus.C_2670068 RRM 113 182

Links

Other RRM family RBPs
Other Capitella teleta RBPs

91 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CBN02327 Caenorhabditis brenneri CBN02327 N 0.000
CBG23235 Caenorhabditis briggsae CBG23235 N 0.000
ccch-1 Caenorhabditis elegans F38B7.1 N 0.000
CJA08180 Caenorhabditis japonica CJA08180 N 0.000
CRE11175 Caenorhabditis remanei CRE11175 N 0.000
gw1.534.24.1 Capitella teleta gw1.534.24.1 I 0.000
ZFP36 Danio rerio ENSDARG00000044395 I 0.000
Minc01603 Meloidogyne incognita Minc01603 N 0.000
Minc02085 Meloidogyne incognita Minc02085 N 0.000
PTSG_01604 Salpingoeca rosetta PTSG_01604 N 0.000