AAH44002 (Xenopus laevis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 AAH44002 T59455_0.6 Xenbase (2010-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ESRP2
M141_0.6 		Homo sapiens UGGGRAD RNAcompete
Ray et al.(2013)
RNCMPT00150 		0.718
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
AAH44002 RRM 228 297
AAH44002 RRM 329 401
AAH44002 RRM 448 520

Links

Other RRM family RBPs
Other Xenopus laevis RBPs

67 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R015210 Ailuropoda melanoleuca Ame_R015210 I 0.935
Ame_R011562 Ailuropoda melanoleuca Ame_R011562 I 0.704
ESRP1 Anolis carolinensis ENSACAG00000003748 I 0.935
ESRP2 Anolis carolinensis ENSACAG00000009900 I 0.833
LOC788414 Bos taurus ENSBTAG00000021838 I 0.935
estExt_gwp.C_3900044 Branchiostoma floridae estExt_gwp.C_3900044 N 0.713
estExt_gwp.C_3900052 Branchiostoma floridae estExt_gwp.C_3900052 N 0.713
LOC100386717 Callithrix jacchus ENSCJAG00000000043 I 0.935
LOC100388530 Callithrix jacchus ENSCJAG00000015709 I 0.708
ESRP1 Canis familiaris ENSCAFG00000009305 I 0.935
ESRP2 Canis familiaris ENSCAFG00000020320 I 0.704
ESRP1 Cavia porcellus ENSCPOG00000012197 I 0.940
esrp2 Danio rerio ENSDARG00000018814 I 0.833
esrp1 Danio rerio ENSDARG00000011245 I 0.838
ESRP2 Dasypus novemcinctus ENSDNOG00000018588 I 0.769
Esrp1 Dipodomys ordii ENSDORG00000011987 N 0.773
Esrp2 Dipodomys ordii ENSDORG00000000665 I 0.782
ESRP2 Echinops telfairi ENSETEG00000006068 I 0.778
ESRP1 Equus caballus ENSECAG00000000784 I 0.935
ESRP1 Erinaceus europaeus ENSEEUG00000001673 I 0.912
ESRP1 Felis catus ENSFCAG00000009920 I 0.935
ESRP2 Felis catus ENSFCAG00000010419 I 0.704
ESRP2_CHICK Gallus gallus ENSGALG00000003374 I 0.833
RBM35A Gallus gallus ENSGALG00000015968 I 0.940
ESRP2 Gasterosteus aculeatus ENSGACG00000016359 N 0.797
ESRP1 Gorilla gorilla ENSGGOG00000003627 I 0.931
ESRP2 Gorilla gorilla ENSGGOG00000010150 I 0.718
ESRP1 Homo sapiens ENSG00000104413 I 0.931
ESRP2 Homo sapiens ENSG00000103067 D 0.718
ESRP2 Loxodonta africana ENSLAFG00000014609 I 0.769
ESRP1 Loxodonta africana ENSLAFG00000001498 I 0.940
ESRP2 Macaca mulatta ENSMMUG00000021846 I 0.708
ESRP1 Macaca mulatta ENSMMUG00000021112 I 0.921
ESRP2 Macropus eugenii ENSMEUG00000014322 I 0.815
ESRP1 Meleagris gallopavo ENSMGAG00000012042 I 0.931
ESRP2 Meleagris gallopavo ENSMGAG00000003943 I 0.833
ESRP1 Microcebus murinus ENSMICG00000008757 I 0.940
ESRP2 Monodelphis domestica ENSMODG00000005183 I 0.787
ESRP1 Monodelphis domestica ENSMODG00000007268 I 0.944
Esrp1 Mus musculus ENSMUSG00000040728 I 0.935
ESRP2 Myotis lucifugus ENSMLUG00000005934 I 0.769
ESRP1 Myotis lucifugus ENSMLUG00000001816 N 0.778
ESRP2 Ochotona princeps ENSOPRG00000013401 I 0.764
ESRP1 Ochotona princeps ENSOPRG00000010595 N 0.792
ESRP1 Ornithorhynchus anatinus ENSOANG00000004746 I 0.944
ESRP2 Ornithorhynchus anatinus ENSOANG00000010972 I 0.778
ESRP1 Oryctolagus cuniculus ENSOCUG00000001316 I 0.935
ESRP2 Oryctolagus cuniculus ENSOCUG00000001242 I 0.708
ESRP1 Pan troglodytes ENSPTRG00000020430 I 0.931
ESRP2 Pan troglodytes ENSPTRG00000008261 I 0.713
ENSPPYG00000018753 Pongo pygmaeus ENSPPYG00000018753 I 0.931
ENSPPYG00000007484 Pongo pygmaeus ENSPPYG00000007484 I 0.713
ESRP2 Procavia capensis ENSPCAG00000005215 I 0.782
ESRP1 Pteropus vampyrus ENSPVAG00000014513 I 0.935
Esrp2 Rattus norvegicus ENSRNOG00000023177 I 0.764
RGD1560481 Rattus norvegicus ENSRNOG00000008184 I 0.926
ESRP2 Sorex araneus ENSSARG00000014176 I 0.769
ESRP1 Sus scrofa ENSSSCG00000006099 I 0.935
RBM35B Taeniopygia guttata ENSTGUG00000006986 I 0.829
RBM35A Taeniopygia guttata ENSTGUG00000011907 I 0.949
ESRP1 Takifugu rubripes ENSTRUG00000009287 N 0.761
ESRP1 Tarsius syrichta ENSTSYG00000006036 I 0.931
ESRP1 Tetraodon nigroviridis ENSTNIG00000018367 N 0.775
ESRP1 Tursiops truncatus ENSTTRG00000004226 I 0.931
ESRP1 Vicugna pacos ENSVPAG00000006566 I 0.926
Q7ZY29 Xenopus laevis Q7ZY29 I 1.000
esrp1 Xenopus tropicalis ENSXETG00000014667 I 1.000