SAMD4B (Echinops telfairi)
SAM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00536 (SAM_1) IPR021129 ENSETEG00000004346 T61781_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SAMD4A
M061_0.6 		Homo sapiens GCKGGHM RNAcompete
Ray et al.(2013)
RNCMPT00063 		0.754
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSETEP00000003558 SAM 298 358

Links

Other SAM family RBPs
Other Echinops telfairi RBPs

80 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ACLA_013700 Aspergillus clavatus CADACLAG00000914 N 0.000
AFLA_119410 Aspergillus flavus CADAFLAG00012513 N 0.000
AFUA_5G10830 Aspergillus fumigatus CADAFUAG00006235 N 0.000
ANIA_04721 Aspergillus nidulans CADANIAG00005708 N 0.000
An14g03770 Aspergillus niger CADANGAG00011313 N 0.000
AO090010000458 Aspergillus oryzae CADAORAG00004519 N 0.000
ATEG_07640 Aspergillus terreus CADATEAG00000474 N 0.000
BDBG_08912 Blastomyces dermatitidis BDBG_08912 N 0.000
BC1G_13853 Botrytis cinerea BC1G_13853 N 0.000
HCAG_00961 Histoplasma capsulatum HCAG_00961 N 0.000
MGYG_03171 Microsporum gypseum MGYG_03171 N 0.000
fgenesh1_pg.C_chr_9000466 Mycosphaerella graminicola fgenesh1_pg.C_chr_9000466 N 0.000
NFIA_076400 Neosartorya fischeri CADNFIAG00008573 N 0.000
PABG_04784 Paracoccidioides brasiliensis PABG_04784 N 0.000
Pc21g10420 Penicillium chrysogenum Pc21g10420 N 0.000
PMAA_073440 Penicillium marneffei PMAA_073440 N 0.000
EAT83861.1 Phaeosphaeria nodorum EAT83861.1 N 0.000
PTRG_08962 Pyrenophora tritici repentis PTRG_08962 N 0.000
SS1G_13866 Sclerotinia sclerotiorum SS1G_13866 N 0.000
SNOG_08693 Stagonospora nodorum SNOG_08693 N 0.000