CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MGYG_03171
(
Microsporum gypseum
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
MGYG_03171
T59946_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MGYG_03171T0
S1
245
319
PILFKIYDGKVTGIKDFGVFVNLQGVRGRVDGLVHVSAMQEGARVNHPSDLVSRGQQVKVKVVSIQDSRIGLSMK
Links
Other
S1
family RBPs
Other
Microsporum gypseum
RBPs
31 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TRV_06617
Trichophyton verrucosum
TRV_06617
N
0.987
TESG_05437
Trichophyton tonsurans
TESG_05437
N
0.987
ARB_03894
Arthroderma benhamiae
ARB_03894
N
0.987
TERG_04997
Trichophyton rubrum
TERG_04997
N
0.973
CPSG_07949
Coccidioides posadasii
CPSG_07949
N
0.868
AFUA_5G10830
Aspergillus fumigatus
CADAFUAG00006235
N
0.867
NFIA_076400
Neosartorya fischeri
CADNFIAG00008573
N
0.853
ACLA_013700
Aspergillus clavatus
CADACLAG00000914
N
0.853
ATEG_07640
Aspergillus terreus
CADATEAG00000474
N
0.853
UREG_00720
Uncinocarpus reesii
UREG_00720
N
0.842
CIMG_00743
Coccidioides immitis
CIMG_00743
N
0.842
PABG_04784
Paracoccidioides brasiliensis
PABG_04784
N
0.840
AO090010000458
Aspergillus oryzae
CADAORAG00004519
N
0.840
AFLA_119410
Aspergillus flavus
CADAFLAG00012513
N
0.840
PMAA_073440
Penicillium marneffei
PMAA_073440
N
0.840
TEQG_01284
Trichophyton equinum
TEQG_01284
N
0.840
ANIA_04721
Aspergillus nidulans
CADANIAG00005708
N
0.827
An14g03770
Aspergillus niger
CADANGAG00011313
N
0.827
Pc21g10420
Penicillium chrysogenum
Pc21g10420
N
0.813
HCAG_00961
Histoplasma capsulatum
HCAG_00961
N
0.813
BDBG_08912
Blastomyces dermatitidis
BDBG_08912
N
0.800
fgenesh1_pg.C_chr_9000466
Mycosphaerella graminicola
fgenesh1_pg.C_chr_9000466
N
0.733
EAT83861.1
Phaeosphaeria nodorum
EAT83861.1
N
0.733
SNOG_08693
Stagonospora nodorum
SNOG_08693
N
0.733
estExt_fgenesh1_pg.C_30380
Cryphonectria parasitica
estExt_fgenesh1_pg.C_30380
N
0.724
SS1G_13866
Sclerotinia sclerotiorum
SS1G_13866
N
0.724
estExt_fgenesh2_pg.C_30399
Neurospora discreta
estExt_fgenesh2_pg.C_30399
N
0.720
NCU06318
Neurospora crassa
NCU06318
N
0.707
PTRG_08962
Pyrenophora tritici repentis
PTRG_08962
N
0.707
estExt_fgenesh1_pg.C_20624
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_20624
N
0.707
BC1G_13853
Botrytis cinerea
BC1G_13853
N
0.707