PTRG_08962 (Pyrenophora tritici repentis)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 PTRG_08962 T59977_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PTRT_08962 S1 249 319

Links

Other S1 family RBPs
Other Pyrenophora tritici repentis RBPs

20 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_fgenesh1_pg.C_20624 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_20624 N 0.944
SNOG_08693 Stagonospora nodorum SNOG_08693 N 0.847
EAT83861.1 Phaeosphaeria nodorum EAT83861.1 N 0.847
BC1G_13853 Botrytis cinerea BC1G_13853 N 0.740
SS1G_13866 Sclerotinia sclerotiorum SS1G_13866 N 0.737
ANIA_04721 Aspergillus nidulans CADANIAG00005708 N 0.736
fgenesh1_pg.C_chr_9000466 Mycosphaerella graminicola fgenesh1_pg.C_chr_9000466 N 0.732
HCAG_00961 Histoplasma capsulatum HCAG_00961 N 0.722
An14g03770 Aspergillus niger CADANGAG00011313 N 0.722
ACLA_013700 Aspergillus clavatus CADACLAG00000914 N 0.720
AFUA_5G10830 Aspergillus fumigatus CADAFUAG00006235 N 0.720
AFLA_119410 Aspergillus flavus CADAFLAG00012513 N 0.716
AO090010000458 Aspergillus oryzae CADAORAG00004519 N 0.716
BDBG_08912 Blastomyces dermatitidis BDBG_08912 N 0.708
PABG_04784 Paracoccidioides brasiliensis PABG_04784 N 0.708
PMAA_073440 Penicillium marneffei PMAA_073440 N 0.708
Pc21g10420 Penicillium chrysogenum Pc21g10420 N 0.708
MGYG_03171 Microsporum gypseum MGYG_03171 N 0.707
NCU06318 Neurospora crassa NCU06318 N 0.707
NFIA_076400 Neosartorya fischeri CADNFIAG00008573 N 0.707