DGIL_AUG5s6088g2t1 (Acyrtosiphon pisum)
CCCH ZF,CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00098 (zf-CCHC) 		IPR000571
IPR001878 		DGIL_AUG5s6088g2t1 T00039_0.6 DroSpeGe (2008-Jul-18)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
DGIL_AUG5s6088g2t1 CCCH ZF 39 56
DGIL_AUG5s6088g2t1 CCCH ZF 63 88
DGIL_AUG5s6088g2t1 CCCH ZF 91 116
DGIL_AUG5s6088g2t1 CCCH ZF 119 144
DGIL_AUG5s6088g2t1 CCCH ZF 144 168
DGIL_AUG5s6088g2t1 CCHC ZF 189 206
DGIL_AUG5s6088g2t1 CCHC ZF 243 260

Links

Other CCCH ZF,CCHC ZF family RBPs
Other Acyrtosiphon pisum RBPs

8 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
amel4_ncbi_hmm9262 Tribolium castaneum amel4_ncbi_hmm9262 N 0.798
amel4_ncbi_hmm9262 Apis mellifera amel4_ncbi_hmm9262 N 0.798
GA17582-RA Drosophila pseudoobscura FBgn0077593 N 0.753
AGAP013044 Anopheles gambiae AGAP013044 N 0.745
Clp Drosophila melanogaster FBgn0015621 N 0.735
ISCW021476 Ixodes scapularis ISCW021476 N 0.733
e_gw1.24.75.1 Daphnia pulex e_gw1.24.75.1 N 0.728
e_gw1.98.132.1 Lottia gigantea e_gw1.98.132.1 N 0.722