CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
MGYG_03105
(
Microsporum gypseum
)
CCCH ZF,RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1)
IPR000571
IPR000504
MGYG_03105
T00301_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MGYG_03105T0
CCCH ZF
260
284
AERCKNYDNMGFCVLGSTCPYQHGQ
MGYG_03105T0
RRM
357
421
IVVEQIPEDKFDEATVREFFSEFGEITEVTMKPYKHLALVKYDSYDAAHRAWSSPKVIFDNRFVK
MGYG_03105T0
RRM
607
660
VAISGVEFDTNRDEALRQYLLGIGEYESIDPSPDRPGALVVSFKDRYVAEKLFH
Links
Other
CCCH ZF,RRM
family RBPs
Other
Microsporum gypseum
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ARB_03836
Arthroderma benhamiae
ARB_03836
N
0.986
TEQG_01215
Trichophyton equinum
TEQG_01215
N
0.986
TESG_05938
Trichophyton tonsurans
TESG_05938
N
0.986
TRV_01755
Trichophyton verrucosum
TRV_01755
N
0.979
TERG_04929
Trichophyton rubrum
TERG_04929
N
0.972
MCYG_03501
Microsporum canis
MCYG_03501
N
0.965