PK13905.1 (Cannabis sativa)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		PK13905.1 T00351_0.6 Cannabis sativa genome (2012-Feb-20)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PK13905.1 CCCH ZF 228 251
PK13905.1 RRM 294 352
PK13905.1 CCCH ZF 361 389

Links

Other CCCH ZF,RRM family RBPs
Other Cannabis sativa RBPs

11 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GSVIVG00023150001 Vitis vinifera GSVIVG00023150001 N 0.893
ppa023225m Prunus persica ppa023225m N 0.885
MDP0000172441 Malus x domestica MDP0000172441 N 0.876
Glyma08g17310.1 Glycine max Glyma08g17310.1 N 0.868
BGIOSIBCE007424 Oryza indica BGIOSIBCE007424 N 0.867
LOC_Os02g35150 Oryza sativa LOC_Os02g35150 N 0.867
29609.m000599 Ricinus communis 29609.m000599 N 0.860
Glyma15g39220.1 Glycine max Glyma15g39220.1 N 0.858
AT1G10320 Arabidopsis thaliana AT1G10320-TAIR-G N 0.851
mgf026159m Mimulus guttatus mgf026159m N 0.851
XM_002892513.1 Arabidopsis lyrata fgenesh2_kg.1__1097__AT1G10320.1 N 0.841