Glyma08g17310.1 (Glycine max)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		Glyma08g17310.1 T00955_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma08g17310.1 CCCH ZF 190 214
Glyma08g17310.1 RRM 258 317
Glyma08g17310.1 CCCH ZF 326 354

Links

Other CCCH ZF,RRM family RBPs
Other Glycine max RBPs

11 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma15g39220.1 Glycine max Glyma15g39220.1 N 0.947
29609.m000599 Ricinus communis 29609.m000599 N 0.877
PK13905.1 Cannabis sativa PK13905.1 N 0.868
ppa023225m Prunus persica ppa023225m N 0.860
LOC_Os02g35150 Oryza sativa LOC_Os02g35150 N 0.851
BGIOSIBCE007424 Oryza indica BGIOSIBCE007424 N 0.851
MDP0000172441 Malus x domestica MDP0000172441 N 0.851
GSVIVG00023150001 Vitis vinifera GSVIVG00023150001 N 0.851
AT1G10320 Arabidopsis thaliana AT1G10320-TAIR-G N 0.842
mgf026159m Mimulus guttatus mgf026159m N 0.833
XM_002892513.1 Arabidopsis lyrata fgenesh2_kg.1__1097__AT1G10320.1 N 0.825