GSVIVG00023150001 (Vitis vinifera)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		GSVIVG00023150001 T00716_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GSVIVT00023150001 CCCH ZF 199 222
GSVIVT00023150001 RRM 292 350
GSVIVT00023150001 CCCH ZF 359 387

Links

Other CCCH ZF,RRM family RBPs
Other Vitis vinifera RBPs

11 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PK13905.1 Cannabis sativa PK13905.1 N 0.893
ppa023225m Prunus persica ppa023225m N 0.876
Glyma08g17310.1 Glycine max Glyma08g17310.1 N 0.851
29609.m000599 Ricinus communis 29609.m000599 N 0.851
BGIOSIBCE007424 Oryza indica BGIOSIBCE007424 N 0.850
MDP0000172441 Malus x domestica MDP0000172441 N 0.850
Glyma15g39220.1 Glycine max Glyma15g39220.1 N 0.850
LOC_Os02g35150 Oryza sativa LOC_Os02g35150 N 0.850
AT1G10320 Arabidopsis thaliana AT1G10320-TAIR-G N 0.842
XM_002892513.1 Arabidopsis lyrata fgenesh2_kg.1__1097__AT1G10320.1 N 0.832
mgf026159m Mimulus guttatus mgf026159m N 0.816