rbm27 (Xenopus tropicalis)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		ENSXETG00000002322 T00654_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSXETP00000004959 CCCH ZF 136 162
ENSXETP00000004960 CCCH ZF 104 130
ENSXETP00000004960 RRM 413 479
ENSXETP00000004961 CCCH ZF 265 291
ENSXETP00000004961 RRM 520 586
ENSXETP00000004962 CCCH ZF 1 27
ENSXETP00000004962 RRM 246 312
ENSXETP00000004962 RRM 573 629

Links

Other CCCH ZF,RRM family RBPs
Other Xenopus tropicalis RBPs

37 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RBM27 Monodelphis domestica ENSMODG00000010182 N 0.963
Rbm27 Mus musculus ENSMUSG00000024491 N 0.963
D3ZE52_RAT Rattus norvegicus ENSRNOG00000027250 N 0.963
RBM27 Tarsius syrichta ENSTSYG00000004303 N 0.963
RBM27 Erinaceus europaeus ENSEEUG00000010335 N 0.963
RBM27 Procavia capensis ENSPCAG00000014786 N 0.963
RBM27 Macaca mulatta ENSMMUG00000004476 N 0.915
RBM27 Ornithorhynchus anatinus ENSOANG00000012563 N 0.915
RBM27 Microcebus murinus ENSMICG00000003262 N 0.915
RBM27 Pan troglodytes ENSPTRG00000017373 N 0.915
RBM27 Sorex araneus ENSSARG00000000313 N 0.915
RBM27 Tupaia belangeri ENSTBEG00000004337 N 0.915
RBM27 Pteropus vampyrus ENSPVAG00000005218 N 0.915
RBM27 Loxodonta africana ENSLAFG00000022447 N 0.915
ENSPPYG00000015909 Pongo pygmaeus ENSPPYG00000015909 N 0.915
RBM27 Ochotona princeps ENSOPRG00000005424 N 0.915
RBM27 Gorilla gorilla ENSGGOG00000013312 N 0.915
RBM27 Cavia porcellus ENSCPOG00000002498 N 0.915
RBM27 Canis familiaris ENSCAFG00000006456 N 0.915
RBM27 Bos taurus ENSBTAG00000011642 N 0.915
Ame_R013204 Ailuropoda melanoleuca Ame_R013204 N 0.915
RBM27 Dasypus novemcinctus ENSDNOG00000019753 N 0.915
RBM27 Tursiops truncatus ENSTTRG00000016713 N 0.915
RBM27 Equus caballus ENSECAG00000000883 N 0.915
RBM27 Homo sapiens ENSG00000091009 N 0.915
RBM27 Oryctolagus cuniculus ENSOCUG00000000186 N 0.904
RBM27 Callithrix jacchus ENSCJAG00000021308 N 0.904
RBM27 Taeniopygia guttata ENSTGUG00000000085 N 0.883
RBM27 Gallus gallus ENSGALG00000007516 N 0.841
ENSGACG00000020719 Gasterosteus aculeatus ENSGACG00000020719 N 0.840
RBM27 Anolis carolinensis ENSACAG00000014177 N 0.821
ENSTRUG00000004518 Takifugu rubripes ENSTRUG00000004518 N 0.809
RBM27 Meleagris gallopavo ENSMGAG00000009467 N 0.781
CU468941.1 Danio rerio ENSDARG00000060521 N 0.728
ENSORLG00000001645 Oryzias latipes ENSORLG00000001645 N 0.722
ENSTNIG00000018215 Tetraodon nigroviridis ENSTNIG00000018215 N 0.715