D3ZE52_RAT (Rattus norvegicus)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		ENSRNOG00000027250 T00615_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000030053 CCCH ZF 254 280
ENSRNOP00000031889 RRM 174 239
ENSRNOP00000035970 CCCH ZF 254 280
ENSRNOP00000035970 RRM 583 648
ENSRNOP00000056947 CCCH ZF 254 280
ENSRNOP00000056947 RRM 528 593

Links

Other CCCH ZF,RRM family RBPs
Other Rattus norvegicus RBPs

44 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RBM27 Cavia porcellus ENSCPOG00000002498 N 1.000
RBM27 Canis familiaris ENSCAFG00000006456 N 1.000
RBM27 Bos taurus ENSBTAG00000011642 N 1.000
RBM27 Spermophilus tridecemlineatus ENSSTOG00000002378 N 1.000
RBM27 Vicugna pacos ENSVPAG00000000558 N 1.000
RBM27 Dasypus novemcinctus ENSDNOG00000019753 N 1.000
RBM27 Equus caballus ENSECAG00000000883 N 1.000
RBM27 Loxodonta africana ENSLAFG00000022447 N 1.000
RBM27 Macaca mulatta ENSMMUG00000004476 N 1.000
RBM27 Gorilla gorilla ENSGGOG00000013312 N 1.000
RBM27 Monodelphis domestica ENSMODG00000010182 N 1.000
Rbm27 Mus musculus ENSMUSG00000024491 N 1.000
RBM27 Homo sapiens ENSG00000091009 N 1.000
RBM27 Sus scrofa ENSSSCG00000014409 N 1.000
RBM27 Otolemur garnettii ENSOGAG00000008758 N 1.000
RBM27 Tursiops truncatus ENSTTRG00000016713 N 1.000
ENSPPYG00000015909 Pongo pygmaeus ENSPPYG00000015909 N 1.000
RBM27 Pan troglodytes ENSPTRG00000017373 N 1.000
RBM27 Pteropus vampyrus ENSPVAG00000005218 N 1.000
RBM27 Sorex araneus ENSSARG00000000313 N 1.000
RBM27 Tupaia belangeri ENSTBEG00000004337 N 1.000
Ame_R013204 Ailuropoda melanoleuca Ame_R013204 N 1.000
RBM27 Erinaceus europaeus ENSEEUG00000010335 N 1.000
Rbm27 Dipodomys ordii ENSDORG00000013392 N 1.000
RBM27 Felis catus ENSFCAG00000005792 N 1.000
RBM27 Ochotona princeps ENSOPRG00000005424 N 1.000
RBM27 Choloepus hoffmanni ENSCHOG00000002831 N 1.000
RBM27 Tarsius syrichta ENSTSYG00000004303 N 1.000
RBM27 Microcebus murinus ENSMICG00000003262 N 1.000
RBM27 Procavia capensis ENSPCAG00000014786 N 1.000
RBM27 Oryctolagus cuniculus ENSOCUG00000000186 N 0.989
RBM27 Callithrix jacchus ENSCJAG00000021308 N 0.989
rbm27 Xenopus tropicalis ENSXETG00000002322 N 0.963
RBM27 Ornithorhynchus anatinus ENSOANG00000012563 N 0.957
RBM27 Macropus eugenii ENSMEUG00000004031 N 0.955
RBM27 Meleagris gallopavo ENSMGAG00000009467 N 0.896
RBM27 Taeniopygia guttata ENSTGUG00000000085 N 0.883
ENSTRUG00000004518 Takifugu rubripes ENSTRUG00000004518 N 0.839
ENSGACG00000020719 Gasterosteus aculeatus ENSGACG00000020719 N 0.830
Rbm26 Dipodomys ordii ENSDORG00000006232 N 0.720
RBM26 Ochotona princeps ENSOPRG00000001124 N 0.720
RBM26 Monodelphis domestica ENSMODG00000001574 N 0.710
RBM26 Echinops telfairi ENSETEG00000017443 N 0.710