CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
ACLA_092660
(
Aspergillus clavatus
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
CADACLAG00008386
T02032_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADACLAP00008176
CCCH ZF
1
19
MVVCTFFQQGRCKFGERCK
Links
Other
CCCH ZF
family RBPs
Other
Aspergillus clavatus
RBPs
12 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
fgenesh1_pg.00009_#_218
Aspergillus carbonarius
fgenesh1_pg.00009_#_218
N
0.842
PABG_07018
Paracoccidioides brasiliensis
PABG_07018
N
0.842
AFUA_2G02160
Aspergillus fumigatus
CADAFUAG00003346
N
0.826
HCAG_08820
Histoplasma capsulatum
HCAG_08820
N
0.789
BDBG_05107
Blastomyces dermatitidis
BDBG_05107
N
0.789
NFIA_034530
Neosartorya fischeri
CADNFIAG00002955
N
0.783
AFLA_043160
Aspergillus flavus
CADAFLAG00005643
N
0.783
ANIA_04595
Aspergillus nidulans
CADANIAG00005841
N
0.739
Pc20g04370
Penicillium chrysogenum
Pc20g04370
N
0.739
NUPL2
Ochotona princeps
ENSOPRG00000013966
N
0.737
FGSG_06067
Fusarium graminearum
FGSG_06067
N
0.737
An07g06750
Aspergillus niger
CADANGAG00005948
N
0.727