CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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FOXG_12762
(
Fusarium oxysporum
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
FOXG_12762
T01384_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FOXG_12762T0
CCCH ZF
71
96
PKTVVCIFYKKGNCEKGKKCKFSHDL
FOXG_12762T0
CCCH ZF
168
182
ICPNGGDKCKYKHAL
Links
Other
CCCH ZF
family RBPs
Other
Fusarium oxysporum
RBPs
9 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
FVEG_11503
Fusarium verticillioides
FVEG_11503
N
1.000
FGSG_10829
Fusarium graminearum
FGSG_10829
N
1.000
GLRG_05139
Colletotrichum graminicola
GLRG_05139
N
0.951
AO090113000083
Aspergillus oryzae
CADAORAG00011692
N
0.805
AFLA_095620
Aspergillus flavus
CADAFLAG00009247
N
0.805
AMAG_12737
Allomyces macrogynus
AMAG_12737
N
0.756
PTRG_00525
Pyrenophora tritici repentis
PTRG_00525
N
0.729
EAT85557.1
Phaeosphaeria nodorum
EAT85557.1
N
0.708
SNOG_06906
Stagonospora nodorum
SNOG_06906
N
0.708