GLRG_05139 (Colletotrichum graminicola)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 GLRG_05139 T01402_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GLRG_05139T0 CCCH ZF 96 121
GLRG_05139T0 CCCH ZF 193 207

Links

Other CCCH ZF family RBPs
Other Colletotrichum graminicola RBPs

10 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
FOXG_12762 Fusarium oxysporum FOXG_12762 N 0.951
FVEG_11503 Fusarium verticillioides FVEG_11503 N 0.951
FGSG_10829 Fusarium graminearum FGSG_10829 N 0.951
AO090113000083 Aspergillus oryzae CADAORAG00011692 N 0.805
AFLA_095620 Aspergillus flavus CADAFLAG00009247 N 0.805
AMAG_12737 Allomyces macrogynus AMAG_12737 N 0.756
PTRG_00525 Pyrenophora tritici repentis PTRG_00525 N 0.729
EAT85557.1 Phaeosphaeria nodorum EAT85557.1 N 0.708
SNOG_06906 Stagonospora nodorum SNOG_06906 N 0.708
YALI0D07018g Yarrowia lipolytica YALI0D07018g N 0.707