CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CPIJ006186
(
Culex quinquefasciatus
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
CPIJ006186
T02174_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CPIJ006186-PA
CCCH ZF
383
409
ESYSLCENFVDNQTCHYGNQCVEAHGI
Links
Other
CCCH ZF
family RBPs
Other
Culex quinquefasciatus
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CpipJ_CPIJ006186
Culex pipiens
CpipJ_CPIJ006186
N
1.000
AAEL008579
Aedes aegypti
AAEL008579
N
0.778
AGAP011545
Anopheles gambiae
AGAP011545
N
0.778
GL26040
Drosophila persimilis
FBgn0163622
N
0.704
GI13941
Drosophila mojavensis
FBgn0136695
N
0.704
GA21777-RA
Drosophila pseudoobscura
FBgn0081762
N
0.704