CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ZC3H7A
(
Canis familiaris
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSCAFG00000018876
T02312_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCAFP00000027849
CCCH ZF
505
524
ICKDVAAEEECRYSGHCTFA
ENSCAFP00000027849
CCCH ZF
771
796
QFDLCNHIASGKKCQYVGNCSFAHSP
ENSCAFP00000027849
CCCH ZF
903
927
YFSICDRYTNGTCTEGNGCKFAHGN
Links
Other
CCCH ZF
family RBPs
Other
Canis familiaris
RBPs
21 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R014090
Ailuropoda melanoleuca
Ame_R014090
N
0.986
ZC3H7A
Macaca mulatta
ENSMMUG00000011242
N
0.958
ZC3H7A
Myotis lucifugus
ENSMLUG00000016057
N
0.958
ZC3H7A
Pteropus vampyrus
ENSPVAG00000015398
N
0.958
ZC3H7A
Loxodonta africana
ENSLAFG00000004255
N
0.958
ZC3H7A
Pan troglodytes
ENSPTRG00000007776
N
0.958
ENSPPYG00000007111
Pongo pygmaeus
ENSPPYG00000007111
N
0.958
ZC3H7A
Gorilla gorilla
ENSGGOG00000009732
N
0.958
ZC3H7A
Procavia capensis
ENSPCAG00000000183
N
0.958
ZC3H7A
Equus caballus
ENSECAG00000003869
N
0.958
ZC3H7A
Homo sapiens
ENSG00000122299
N
0.958
ZC3H7A
Callithrix jacchus
ENSCJAG00000008403
N
0.944
A7Z062_BOVIN
Bos taurus
ENSBTAG00000014826
N
0.944
ZC3H7A
Oryctolagus cuniculus
ENSOCUG00000017012
N
0.915
ZC3H7A
Ochotona princeps
ENSOPRG00000004406
N
0.915
ZC3H7A
Choloepus hoffmanni
ENSCHOG00000005905
N
0.915
Zc3h7a
Dipodomys ordii
ENSDORG00000013662
N
0.901
D3ZP12_RAT
Rattus norvegicus
ENSRNOG00000002420
N
0.859
ZC3H7A
Cavia porcellus
ENSCPOG00000004454
N
0.831
ZC3H7A
Otolemur garnettii
ENSOGAG00000010411
N
0.803
ZC3H7A
Vicugna pacos
ENSVPAG00000006902
N
0.761