CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ZC3H7A
(
Loxodonta africana
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSLAFG00000004255
T02780_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLAFP00000003548
CCCH ZF
505
524
ICKDVAAEEECRYSGHCTFA
ENSLAFP00000003548
CCCH ZF
771
796
QFDLCNHIASGKKCQYVGNCSFAHSP
ENSLAFP00000003548
CCCH ZF
903
927
YFSICDRYMNGTCREGNSCKFAHGN
Links
Other
CCCH ZF
family RBPs
Other
Loxodonta africana
RBPs
21 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ZC3H7A
Gorilla gorilla
ENSGGOG00000009732
N
0.986
ZC3H7A
Homo sapiens
ENSG00000122299
N
0.986
ENSPPYG00000007111
Pongo pygmaeus
ENSPPYG00000007111
N
0.986
ZC3H7A
Macaca mulatta
ENSMMUG00000011242
N
0.986
ZC3H7A
Pan troglodytes
ENSPTRG00000007776
N
0.986
ZC3H7A
Myotis lucifugus
ENSMLUG00000016057
N
0.972
ZC3H7A
Callithrix jacchus
ENSCJAG00000008403
N
0.972
ZC3H7A
Equus caballus
ENSECAG00000003869
N
0.972
Ame_R014090
Ailuropoda melanoleuca
Ame_R014090
N
0.972
ZC3H7A
Pteropus vampyrus
ENSPVAG00000015398
N
0.972
ZC3H7A
Procavia capensis
ENSPCAG00000000183
N
0.972
A7Z062_BOVIN
Bos taurus
ENSBTAG00000014826
N
0.958
ZC3H7A
Canis familiaris
ENSCAFG00000018876
N
0.958
ZC3H7A
Oryctolagus cuniculus
ENSOCUG00000017012
N
0.930
ZC3H7A
Choloepus hoffmanni
ENSCHOG00000005905
N
0.930
ZC3H7A
Ochotona princeps
ENSOPRG00000004406
N
0.915
Zc3h7a
Dipodomys ordii
ENSDORG00000013662
N
0.901
D3ZP12_RAT
Rattus norvegicus
ENSRNOG00000002420
N
0.873
ZC3H7A
Cavia porcellus
ENSCPOG00000004454
N
0.845
ZC3H7A
Otolemur garnettii
ENSOGAG00000010411
N
0.817
ZC3H7A
Vicugna pacos
ENSVPAG00000006902
N
0.775