CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ZC3H7A
(
Vicugna pacos
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSVPAG00000006902
T03620_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSVPAP00000006415
CCCH ZF
505
524
ICKDVAAEEECRYSGHCTFA
ENSVPAP00000006415
CCCH ZF
771
796
QFDLCNHIASGKKCQYVGNCSFAHSP
ENSVPAP00000006415
CCCH ZF
917
927
XGSSCKFAHGN
Links
Other
CCCH ZF
family RBPs
Other
Vicugna pacos
RBPs
19 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ZC3H7A
Equus caballus
ENSECAG00000003869
N
0.789
ZC3H7A
Myotis lucifugus
ENSMLUG00000016057
N
0.789
ZC3H7A
Callithrix jacchus
ENSCJAG00000008403
N
0.789
ZC3H7A
Macaca mulatta
ENSMMUG00000011242
N
0.775
ZC3H7A
Procavia capensis
ENSPCAG00000000183
N
0.775
ZC3H7A
Pan troglodytes
ENSPTRG00000007776
N
0.775
ENSPPYG00000007111
Pongo pygmaeus
ENSPPYG00000007111
N
0.775
ZC3H7A
Gorilla gorilla
ENSGGOG00000009732
N
0.775
ZC3H7A
Loxodonta africana
ENSLAFG00000004255
N
0.775
A7Z062_BOVIN
Bos taurus
ENSBTAG00000014826
N
0.775
ZC3H7A
Homo sapiens
ENSG00000122299
N
0.775
ZC3H7A
Canis familiaris
ENSCAFG00000018876
N
0.761
ZC3H7A
Pteropus vampyrus
ENSPVAG00000015398
N
0.761
ZC3H7A
Choloepus hoffmanni
ENSCHOG00000005905
N
0.761
Ame_R014090
Ailuropoda melanoleuca
Ame_R014090
N
0.761
Zc3h7a
Dipodomys ordii
ENSDORG00000013662
N
0.761
ZC3H7A
Oryctolagus cuniculus
ENSOCUG00000017012
N
0.746
D3ZP12_RAT
Rattus norvegicus
ENSRNOG00000002420
N
0.732
ZC3H7A
Ochotona princeps
ENSOPRG00000004406
N
0.732