CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
MKRN3
(
Cavia porcellus
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSCPOG00000003604
T02389_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCPOP00000014422
CCCH ZF
64
89
TKQILCRYYLHGQCKEEENCPYSHDL
ENSCPOP00000014422
CCCH ZF
211
234
MPLCRYAARGLCFYGERCLYLHGD
ENSCPOP00000014422
CCCH ZF
366
392
RNKPCMYFAEGRGHCPFGDNCFYKHEY
Links
Other
CCCH ZF
family RBPs
Other
Cavia porcellus
RBPs
12 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
MKRN3
Spermophilus tridecemlineatus
ENSSTOG00000006095
N
0.759
Q6J9M5_PANTR
Pan troglodytes
ENSPTRG00000006823
N
0.753
Mkrn3
Rattus norvegicus
ENSRNOG00000010172
N
0.753
MKRN3
Callithrix jacchus
ENSCJAG00000022162
N
0.753
MKRN3
Homo sapiens
ENSG00000179455
N
0.753
Q6J9M4_9PRIM
Gorilla gorilla
ENSGGOG00000013279
N
0.753
Mkrn3
Mus musculus
ENSMUSG00000070527
N
0.753
MKRN3
Tarsius syrichta
ENSTSYG00000009002
N
0.747
ENSPPYG00000006266
Pongo pygmaeus
ENSPPYG00000006266
N
0.740
MKRN3
Macaca mulatta
ENSMMUG00000007879
N
0.740
MKRN3
Oryctolagus cuniculus
ENSOCUG00000012822
N
0.734
MKRN3
Procavia capensis
ENSPCAG00000016788
N
0.709