MKRN3 (Spermophilus tridecemlineatus)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSSTOG00000006095 T03400_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSSTOP00000005440 CCCH ZF 42 67
ENSSTOP00000005440 CCCH ZF 186 211
ENSSTOP00000005440 CCCH ZF 343 369

Links

Other CCCH ZF family RBPs
Other Spermophilus tridecemlineatus RBPs

12 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MKRN3 Tarsius syrichta ENSTSYG00000009002 N 0.785
MKRN3 Oryctolagus cuniculus ENSOCUG00000012822 N 0.785
MKRN3 Cavia porcellus ENSCPOG00000003604 N 0.759
MKRN3 Felis catus ENSFCAG00000009688 N 0.747
Ame_R014340 Ailuropoda melanoleuca Ame_R014340 N 0.747
ENSPPYG00000006266 Pongo pygmaeus ENSPPYG00000006266 N 0.722
Q6J9M5_PANTR Pan troglodytes ENSPTRG00000006823 N 0.722
Q6J9M4_9PRIM Gorilla gorilla ENSGGOG00000013279 N 0.722
MKRN3 Homo sapiens ENSG00000179455 N 0.722
MKRN3 Callithrix jacchus ENSCJAG00000022162 N 0.722
MKRN3 Choloepus hoffmanni ENSCHOG00000004895 N 0.709
MKRN3 Macaca mulatta ENSMMUG00000007879 N 0.709