mbnl1 (Danio rerio)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSDARG00000052978 T02459_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000069410 CCCH ZF 81 107
ENSDARP00000069410 CCCH ZF 118 141
ENSDARP00000069415 CCCH ZF 81 107
ENSDARP00000069415 CCCH ZF 118 141
ENSDARP00000088832 CCCH ZF 81 107
ENSDARP00000088832 CCCH ZF 118 141
ENSDARP00000088834 CCCH ZF 81 107
ENSDARP00000088834 CCCH ZF 118 141

Links

Other CCCH ZF family RBPs
Other Danio rerio RBPs

13 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MBNL1 Homo sapiens ENSG00000152601 D 0.941
MBNL1 Monodelphis domestica ENSMODG00000015838 I 0.941
MBNL2 Equus caballus ENSECAG00000020574 N 0.882
A5HMN7_CHICK Gallus gallus ENSGALG00000006066 I 0.863
mbnl2 Danio rerio ENSDARG00000018460 I 0.843
MBNL3 Homo sapiens ENSG00000076770 I 0.843
LOC100397507 Callithrix jacchus ENSCJAG00000004080 I 0.843
MBNL3 Macaca mulatta ENSMMUG00000003071 I 0.843
fgenesh2_pg.scaffold_93000116 Branchiostoma floridae fgenesh2_pg.scaffold_93000116 N 0.824
Mbnl3 Mus musculus ENSMUSG00000036109 I 0.824
XR_020327.1 Pan troglodytes ENSPTRG00000022280 N 0.824
fgenesh2_pg.scaffold_81000033 Branchiostoma floridae fgenesh2_pg.scaffold_81000033 N 0.824