CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MBNL2
(
Equus caballus
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSECAG00000020574
T02537_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSECAP00000018199
CCCH ZF
82
108
DKLEVCREFQRGNCARGETDCRFAHPA
ENSECAP00000018199
CCCH ZF
120
142
VTVCMDYIKGRCMREKCKYFHPP
ENSECAP00000018309
CCCH ZF
82
108
DKLEVCREFQRGNCARGETDCRFAHPA
ENSECAP00000018309
CCCH ZF
120
142
VTVCMDYIKGRCMREKCKYFHPP
Links
Other
CCCH ZF
family RBPs
Other
Equus caballus
RBPs
13 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
mbnl2
Danio rerio
ENSDARG00000018460
I
0.900
mbnl1
Danio rerio
ENSDARG00000052978
N
0.882
MBNL1
Monodelphis domestica
ENSMODG00000015838
I
0.882
MBNL1
Homo sapiens
ENSG00000152601
D
0.882
A5HMN7_CHICK
Gallus gallus
ENSGALG00000006066
I
0.882
LOC100397507
Callithrix jacchus
ENSCJAG00000004080
I
0.863
MBNL3
Macaca mulatta
ENSMMUG00000003071
I
0.863
MBNL3
Homo sapiens
ENSG00000076770
I
0.863
fgenesh2_pg.scaffold_93000116
Branchiostoma floridae
fgenesh2_pg.scaffold_93000116
N
0.860
fgenesh2_pg.scaffold_81000033
Branchiostoma floridae
fgenesh2_pg.scaffold_81000033
N
0.860
XR_020327.1
Pan troglodytes
ENSPTRG00000022280
N
0.843
Mbnl3
Mus musculus
ENSMUSG00000036109
I
0.824