CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSMGAG00000013110
(
Meleagris gallopavo
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSMGAG00000013110
T02852_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMGAP00000013833
CCCH ZF
74
98
KLHVCQYFLRGQCRFGSSCKRSHDF
Links
Other
CCCH ZF
family RBPs
Other
Meleagris gallopavo
RBPs
17 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PARP12
Taeniopygia guttata
ENSTGUG00000011354
N
0.960
PARP12
Gallus gallus
ENSGALG00000012788
N
0.960
PARP12
Sorex araneus
ENSSARG00000012642
N
0.800
ENSMODG00000013713
Monodelphis domestica
ENSMODG00000013713
N
0.800
PARP12
Microcebus murinus
ENSMICG00000003163
N
0.800
PARP12
Cavia porcellus
ENSCPOG00000011210
N
0.760
PARP12
Erinaceus europaeus
ENSEEUG00000002654
N
0.760
PARP12
Echinops telfairi
ENSETEG00000013423
N
0.760
PARP12
Canis familiaris
ENSCAFG00000003997
N
0.760
PARP12
Tarsius syrichta
ENSTSYG00000004008
N
0.760
Parp12
Mus musculus
ENSMUSG00000038507
N
0.760
PARP12
Spermophilus tridecemlineatus
ENSSTOG00000004578
N
0.760
D4A3V3_RAT
Rattus norvegicus
ENSRNOG00000008196
N
0.760
PARP12
Macropus eugenii
ENSMEUG00000008233
N
0.720
PARP12
Tursiops truncatus
ENSTTRG00000015180
N
0.720
PARP12
Oryctolagus cuniculus
ENSOCUG00000003213
N
0.720
Ame_R001967
Ailuropoda melanoleuca
Ame_R001967
N
0.720