CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Parp12
(
Mus musculus
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSMUSG00000038507
T03002_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000039704
CCCH ZF
186
210
KLHICQYFLQGECKFGTSCKRSHEF
Links
Other
CCCH ZF
family RBPs
Other
Mus musculus
RBPs
18 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
D4A3V3_RAT
Rattus norvegicus
ENSRNOG00000008196
N
1.000
PARP12
Microcebus murinus
ENSMICG00000003163
N
0.960
PARP12
Tarsius syrichta
ENSTSYG00000004008
N
0.920
PARP12
Spermophilus tridecemlineatus
ENSSTOG00000004578
N
0.920
PARP12
Canis familiaris
ENSCAFG00000003997
N
0.920
PARP12
Echinops telfairi
ENSETEG00000013423
N
0.880
PARP12
Cavia porcellus
ENSCPOG00000011210
N
0.880
Ame_R001967
Ailuropoda melanoleuca
Ame_R001967
N
0.880
PARP12
Tursiops truncatus
ENSTTRG00000015180
N
0.880
PARP12
Erinaceus europaeus
ENSEEUG00000002654
N
0.840
PARP12
Macropus eugenii
ENSMEUG00000008233
N
0.800
ENSGACG00000013321
Gasterosteus aculeatus
ENSGACG00000013321
N
0.769
ENSMGAG00000013110
Meleagris gallopavo
ENSMGAG00000013110
N
0.760
PARP12
Dasypus novemcinctus
ENSDNOG00000009685
N
0.760
PARP12
Oryctolagus cuniculus
ENSOCUG00000003213
N
0.760
ENSMODG00000013713
Monodelphis domestica
ENSMODG00000013713
N
0.720
PARP12
Taeniopygia guttata
ENSTGUG00000011354
N
0.720
PARP12
Gallus gallus
ENSGALG00000012788
N
0.720