CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
ZFP36L1
(
Otolemur garnettii
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSOGAG00000010033
T03087_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOGAP00000008964
CCCH ZF
108
131
SRYTLCRFEEGACKYGKCQFAHGI
ENSOGAP00000008964
CCCH ZF
143
169
YKTELCRTFHTIGFCPYGPRCHFIHNA
Links
Other
CCCH ZF
family RBPs
Other
Otolemur garnettii
RBPs
107 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ZFP36L1
Homo sapiens
ENSG00000185650
I
0.818
LOC100063597
Equus caballus
ENSECAG00000018860
I
0.818
ZFP36L1
Loxodonta africana
ENSLAFG00000028594
I
0.818
ENSACAG00000005547
Anolis carolinensis
ENSACAG00000005547
I
0.818
ZFP36L1
Tarsius syrichta
ENSTSYG00000009284
I
0.818
ZFP36L1
Tursiops truncatus
ENSTTRG00000003475
I
0.818
Zfp36l1
Dipodomys ordii
ENSDORG00000008348
I
0.818
ZFP36L1
Dasypus novemcinctus
ENSDNOG00000005159
I
0.818
ZFP36L1
Canis familiaris
ENSCAFG00000016497
I
0.818
A7MB98_BOVIN
Bos taurus
ENSBTAG00000025434
I
0.818
Ame_R004924
Ailuropoda melanoleuca
Ame_R004924
I
0.818
LOC100405281
Callithrix jacchus
ENSCJAG00000015116
I
0.818
zfp36l1a
Danio rerio
ENSDARG00000016154
I
0.818
ZFP36L1
Cavia porcellus
ENSCPOG00000025078
I
0.818
Zfp36l1
Mus musculus
ENSMUSG00000021127
I
0.818
ZFP36L1
Macropus eugenii
ENSMEUG00000003070
I
0.818
TISB_RAT
Rattus norvegicus
ENSRNOG00000030024
I
0.818
ZFP36L1
Sus scrofa
ENSSSCG00000002302
I
0.818
XR_022888.1
Pan troglodytes
ENSPTRG00000030712
I
0.818
ENSPPYG00000005933
Pongo pygmaeus
ENSPPYG00000005933
I
0.818
ZFP36L1
Procavia capensis
ENSPCAG00000005383
I
0.818
ZFP36L1
Oryctolagus cuniculus
ENSOCUG00000003168
I
0.818
ZFP36L1
Spermophilus tridecemlineatus
ENSSTOG00000009758
I
0.818
ZFP36L1
Pteropus vampyrus
ENSPVAG00000011686
I
0.818
AAD24208
Xenopus laevis
AAD24208
I
0.800
AAD24209
Xenopus laevis
AAD24209
I
0.800
ZFP36L1
Gasterosteus aculeatus
ENSGACG00000011271
I
0.800
ZFP36L1
Taeniopygia guttata
ENSTGUG00000011494
I
0.800
ZFP36L1
Oryzias latipes
ENSORLG00000011106
I
0.800
ZFP36L2
Ornithorhynchus anatinus
ENSOANG00000002848
I
0.800
ZFP36L1
Takifugu rubripes
ENSTRUG00000012295
I
0.800
AAH84197
Xenopus laevis
AAH84197
I
0.800
AAH44086
Xenopus laevis
AAH44086
I
0.800
zfp36l2
Xenopus tropicalis
ENSXETG00000009274
I
0.800
Q805B4
Xenopus laevis
Q805B4
I
0.800
ZFP36L2
Anolis carolinensis
ENSACAG00000014740
I
0.800
AAH84221
Xenopus laevis
AAH84221
I
0.800
zfp36l1
Xenopus tropicalis
ENSXETG00000016987
I
0.800
AAI00163
Xenopus laevis
AAI00163
I
0.800
BAC54909
Xenopus laevis
BAC54909
I
0.800
Q7ZXW9
Xenopus laevis
Q7ZXW9
I
0.800
LOC100386590
Callithrix jacchus
ENSCJAG00000014571
I
0.782
Ame_R000168
Ailuropoda melanoleuca
Ame_R000168
I
0.782
ZFP36L2
Canis familiaris
ENSCAFG00000002438
I
0.782
Q1JP65_BOVIN
Bos taurus
ENSBTAG00000003553
I
0.782
ZFP36L1
Tetraodon nigroviridis
ENSTNIG00000002277
I
0.782
ZFP36L2
Pan troglodytes
ENSPTRG00000011870
I
0.782
ENSSSCG00000008460
Sus scrofa
ENSSSCG00000008460
I
0.782
ZFP36L2
Myotis lucifugus
ENSMLUG00000015588
I
0.782
ZFP36L2
Loxodonta africana
ENSLAFG00000004265
I
0.782
ZFP36L2
Macropus eugenii
ENSMEUG00000010649
I
0.782
ZFP36L2
Microcebus murinus
ENSMICG00000010318
I
0.782
ZFP36L2
Sus scrofa
ENSSSCG00000008461
I
0.782
ZFP36L2
Tursiops truncatus
ENSTTRG00000006356
I
0.782
ZFP36L2
Gorilla gorilla
ENSGGOG00000001402
I
0.782
ZFP36L2
Monodelphis domestica
ENSMODG00000000407
I
0.782
ENSPPYG00000012458
Pongo pygmaeus
ENSPPYG00000012458
I
0.782
ZFP36L2
Cavia porcellus
ENSCPOG00000022038
I
0.782
e_gw.346.37.1
Nematostella vectensis
e_gw.346.37.1
I
0.782
ZFP36L2
Tupaia belangeri
ENSTBEG00000012370
I
0.782
Zfp36l2
Rattus norvegicus
ENSRNOG00000005067
I
0.782
Zfp36l2
Mus musculus
ENSMUSG00000045817
I
0.782
ZFP36L2
Homo sapiens
ENSG00000152518
I
0.782
zfp36l2
Danio rerio
ENSDARG00000021806
I
0.764
XP_782811.1
Strongylocentrotus purpuratus
XP_782811.1
I
0.764
ZFP36L2
Tetraodon nigroviridis
ENSTNIG00000017103
I
0.764
XP_001175810.1
Strongylocentrotus purpuratus
XP_001175810.1
I
0.764
XP_001175665.1
Strongylocentrotus purpuratus
XP_001175665.1
I
0.764
e_gw1.40.110.1
Trichoplax adhaerens
e_gw1.40.110.1
I
0.764
gw1.42.93.1
Daphnia pulex
gw1.42.93.1
N
0.764
ZFP36L2
Procavia capensis
ENSPCAG00000010765
I
0.764
estExt_fgenesh2_pg.C_680108
Branchiostoma floridae
estExt_fgenesh2_pg.C_680108
I
0.764
XP_001178437.1
Strongylocentrotus purpuratus
XP_001178437.1
I
0.764
ENSTNIG00000019802
Tetraodon nigroviridis
ENSTNIG00000019802
I
0.764
ZFP36L2
Takifugu rubripes
ENSTRUG00000006923
I
0.764
amel4_ncbi_hmm10964
Apis mellifera
amel4_ncbi_hmm10964
I
0.764
CABZ01070258.1
Danio rerio
ENSDARG00000040503
I
0.745
zfp36l1b
Danio rerio
ENSDARG00000021443
I
0.745
ENSGACG00000013400
Gasterosteus aculeatus
ENSGACG00000013400
I
0.745
ENSTRUG00000003178
Takifugu rubripes
ENSTRUG00000003178
I
0.745
ENSORLG00000000589
Oryzias latipes
ENSORLG00000000589
I
0.745
ZFP36L2
Felis catus
ENSFCAG00000013462
N
0.727
nasonia_NCBI_hmm9264
Nasonia vitripennis
nasonia_NCBI_hmm9264
I
0.727
ENSCSAVG00000002923
Ciona savignyi
ENSCSAVG00000002923
I
0.727
gw1.30.59.1
Lottia gigantea
gw1.30.59.1
N
0.727
CPIJ018734
Culex quinquefasciatus
CPIJ018734
I
0.727
AGAP010954
Anopheles gambiae
AGAP010954
N
0.727
CpipJ_CPIJ018734
Culex pipiens
CpipJ_CPIJ018734
I
0.727
XP_002159721.1
Hydra magnipapillata
XP_002159721.1
N
0.727
AAEL002308
Aedes aegypti
AAEL002308
I
0.727
BGIBMGA008337
Bombyx mori
BGIBMGA008337
I
0.727
Q4H2G7_CIOIN
Ciona intestinalis
ENSCING00000014446
I
0.727
GA17935-RA
Drosophila pseudoobscura
FBgn0077944
N
0.709
GF21384
Drosophila ananassae
FBgn0098386
N
0.709
ZFP36
Takifugu rubripes
ENSTRUG00000002023
I
0.709
GG17735
Drosophila erecta
FBgn0109957
N
0.709
Tis11
Drosophila melanogaster
FBgn0011837
N
0.709
zgc:114130
Danio rerio
ENSDARG00000040725
I
0.709
GK25600
Drosophila willistoni
FBgn0227559
N
0.709
GE17025
Drosophila yakuba
FBgn0234511
N
0.709
gw1.534.24.1
Capitella teleta
gw1.534.24.1
I
0.709
GJ15863
Drosophila virilis
FBgn0203050
N
0.709
GM11580
Drosophila sechellia
FBgn0166523
N
0.709
GI21684
Drosophila mojavensis
FBgn0144414
N
0.709
GL13141
Drosophila persimilis
FBgn0150747
N
0.709
ZFP36
Gasterosteus aculeatus
ENSGACG00000008344
I
0.709
GH17894
Drosophila grimshawi
FBgn0125362
N
0.709