CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MBNL2
(
Otolemur garnettii
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSOGAG00000017001
T03097_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOGAP00000015220
CCCH ZF
3
11
EECKFAHPP
ENSOGAP00000015220
CCCH ZF
150
174
XXVCREFQRGNCARGETDCRFAHPA
ENSOGAP00000015220
CCCH ZF
186
208
VTVCMDYIKGRCMREKCKYFHPP
Links
Other
CCCH ZF
family RBPs
Other
Otolemur garnettii
RBPs
22 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
MBNL2
Felis catus
ENSFCAG00000005148
N
0.812
MBNL2
Canis familiaris
ENSCAFG00000005523
I
0.788
MBNL2
Oryctolagus cuniculus
ENSOCUG00000000220
I
0.788
MBNL1
Meleagris gallopavo
ENSMGAG00000010862
N
0.738
MBNL1
Felis catus
ENSFCAG00000002293
N
0.738
MBNL1
Procavia capensis
ENSPCAG00000002143
N
0.738
Ame_R004201
Ailuropoda melanoleuca
Ame_R004201
N
0.738
A5PJM0_BOVIN
Bos taurus
ENSBTAG00000004564
N
0.738
MBNL1
Sus scrofa
ENSSSCG00000011720
N
0.738
Q8CIQ0_RAT
Rattus norvegicus
ENSRNOG00000014076
N
0.738
MBNL2
Macaca mulatta
ENSMMUG00000022744
N
0.733
MBNL2
Dasypus novemcinctus
ENSDNOG00000018141
N
0.733
MBNL1
Gorilla gorilla
ENSGGOG00000009430
I
0.727
MBNL1
Homo sapiens
ENSG00000152601
D
0.727
MBNL1
Tetraodon nigroviridis
ENSTNIG00000007695
N
0.727
MBNL3
Ornithorhynchus anatinus
ENSOANG00000011697
I
0.723
MBNL3
Tarsius syrichta
ENSTSYG00000014189
N
0.723
LOC100392264
Callithrix jacchus
ENSCJAG00000001054
I
0.716
MBNL3
Monodelphis domestica
ENSMODG00000015304
I
0.712
MBNL3
Sus scrofa
ENSSSCG00000012676
N
0.708
MBNL3
Tupaia belangeri
ENSTBEG00000008063
N
0.708
MBNL3
Cavia porcellus
ENSCPOG00000008092
N
0.708