MBNL1 (Tetraodon nigroviridis)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSTNIG00000007695 T03488_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000002142 CCCH ZF 3 20
ENSTNIP00000002142 CCCH ZF 130 156
ENSTNIP00000002142 CCCH ZF 167 190
ENSTNIP00000010512 CCCH ZF 1 15
ENSTNIP00000010512 CCCH ZF 125 151
ENSTNIP00000010512 CCCH ZF 162 185

Links

Other CCCH ZF family RBPs
Other Tetraodon nigroviridis RBPs

29 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MBNL1 Gorilla gorilla ENSGGOG00000009430 I 0.955
MBNL1 Meleagris gallopavo ENSMGAG00000010862 N 0.955
MBNL1 Procavia capensis ENSPCAG00000002143 N 0.955
MBNL1 Sus scrofa ENSSSCG00000011720 N 0.955
Q8CIQ0_RAT Rattus norvegicus ENSRNOG00000014076 N 0.955
MBNL1 Felis catus ENSFCAG00000002293 N 0.955
MBNL1 Homo sapiens ENSG00000152601 D 0.955
Ame_R004201 Ailuropoda melanoleuca Ame_R004201 N 0.955
A5PJM0_BOVIN Bos taurus ENSBTAG00000004564 N 0.955
LOC100392264 Callithrix jacchus ENSCJAG00000001054 I 0.940
MBNL3 Monodelphis domestica ENSMODG00000015304 I 0.909
MBNL2 Oryctolagus cuniculus ENSOCUG00000000220 I 0.896
MBNL2 Canis familiaris ENSCAFG00000005523 I 0.896
MBNL2 Felis catus ENSFCAG00000005148 N 0.894
MBNL3 Ornithorhynchus anatinus ENSOANG00000011697 I 0.894
MBNL3 Cavia porcellus ENSCPOG00000008092 N 0.879
MBNL3 Sus scrofa ENSSSCG00000012676 N 0.879
MBNL3 Procavia capensis ENSPCAG00000014188 N 0.879
MBNL3 Macaca mulatta ENSMMUG00000003071 I 0.866
LOC100397507 Callithrix jacchus ENSCJAG00000004080 I 0.866
MBNL3 Homo sapiens ENSG00000076770 I 0.866
MBNL3 Tupaia belangeri ENSTBEG00000008063 N 0.864
mbnl3 Xenopus tropicalis ENSXETG00000005409 I 0.819
MBNL3 Tarsius syrichta ENSTSYG00000014189 N 0.791
MBNL2 Otolemur garnettii ENSOGAG00000017001 N 0.727
MBNL2 Macaca mulatta ENSMMUG00000022744 N 0.711
MBNL2 Dasypus novemcinctus ENSDNOG00000018141 N 0.711
MBNL3 Echinops telfairi ENSETEG00000015907 N 0.711